Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CD74P04233 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
CD74P04233 AC005229.1-201ENST00000392885 409 ntBASIC11.65□□□□□ -0.54
CD74P04233 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC11.65□□□□□ -0.54
CD74P04233 FAM58BP-201ENST00000439056 645 ntBASIC11.65□□□□□ -0.54
CD74P04233 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.65□□□□□ -0.54
CD74P04233 KLF2P1-201ENST00000447438 1042 ntBASIC11.65□□□□□ -0.54
CD74P04233 HIST2H2BB-201ENST00000449108 381 ntBASIC11.65□□□□□ -0.54
CD74P04233 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.65□□□□□ -0.54
CD74P04233 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CD74P04233 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CD74P04233 SERBP1P5-201ENST00000510079 1181 ntBASIC11.65□□□□□ -0.54
CD74P04233 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.65□□□□□ -0.54
CD74P04233 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC11.65□□□□□ -0.54
CD74P04233 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CD74P04233 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC11.65□□□□□ -0.54
CD74P04233 SKA2-205ENST00000580541 689 ntTSL 3 BASIC11.65□□□□□ -0.54
CD74P04233 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.65□□□□□ -0.54
CD74P04233 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC11.65□□□□□ -0.54
CD74P04233 AC106028.4-201ENST00000614509 607 ntBASIC11.65□□□□□ -0.54
CD74P04233 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC11.65□□□□□ -0.54
CD74P04233 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CD74P04233 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CD74P04233 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC11.65□□□□□ -0.54
CD74P04233 AL359510.2-201ENST00000624958 2249 ntBASIC11.65□□□□□ -0.54
CD74P04233 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.65□□□□□ -0.54
CD74P04233 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CD74P04233 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CD74P04233 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CD74P04233 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.65□□□□□ -0.54
CD74P04233 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CD74P04233 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
CD74P04233 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CD74P04233 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CD74P04233 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
CD74P04233 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC11.65□□□□□ -0.55
CD74P04233 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.65□□□□□ -0.55
CD74P04233 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CD74P04233 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
CD74P04233 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
CD74P04233 RBM22P2-201ENST00000393978 1814 ntBASIC11.65□□□□□ -0.55
CD74P04233 FAM90A17P-201ENST00000533716 1957 ntBASIC11.65□□□□□ -0.55
CD74P04233 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
CD74P04233 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CD74P04233 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
CD74P04233 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
CD74P04233 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CD74P04233 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC11.64□□□□□ -0.55
CD74P04233 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
CD74P04233 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CD74P04233 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC11.64□□□□□ -0.55
CD74P04233 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 AC007336.3-201ENST00000623886 2160 ntBASIC11.64□□□□□ -0.55
CD74P04233 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CD74P04233 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.64□□□□□ -0.55
CD74P04233 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CD74P04233 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 AC092933.1-201ENST00000393644 945 ntBASIC11.64□□□□□ -0.55
CD74P04233 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
CD74P04233 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC11.64□□□□□ -0.55
CD74P04233 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 AC012441.2-201ENST00000444843 739 ntBASIC11.64□□□□□ -0.55
CD74P04233 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC11.64□□□□□ -0.55
CD74P04233 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 AC078819.1-201ENST00000547454 765 ntBASIC11.64□□□□□ -0.55
CD74P04233 AC012085.1-201ENST00000548270 765 ntBASIC11.64□□□□□ -0.55
CD74P04233 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.64□□□□□ -0.55
CD74P04233 DNM1P51-201ENST00000558149 522 ntBASIC11.64□□□□□ -0.55
CD74P04233 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.64□□□□□ -0.55
CD74P04233 WASH4P-201ENST00000564273 1246 ntBASIC11.64□□□□□ -0.55
CD74P04233 MIR4783-201ENST00000580343 82 ntBASIC11.64□□□□□ -0.55
CD74P04233 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.64□□□□□ -0.55
CD74P04233 AC010319.3-201ENST00000597028 470 ntBASIC11.64□□□□□ -0.55
CD74P04233 AC091271.1-201ENST00000611877 1162 ntBASIC11.64□□□□□ -0.55
CD74P04233 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC11.64□□□□□ -0.55
CD74P04233 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CD74P04233 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CD74P04233 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CD74P04233 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms