Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VTNP04004 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
VTNP04004 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VTNP04004 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
VTNP04004 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
VTNP04004 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
VTNP04004 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.05■□□□□ -0
VTNP04004 RNA5SP491-201ENST00000362936 118 ntBASIC15.05■□□□□ -0
VTNP04004 SNORA50C-201ENST00000408535 133 ntBASIC15.05■□□□□ -0
VTNP04004 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC15.05■□□□□ -0
VTNP04004 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.05■□□□□ -0
VTNP04004 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.05■□□□□ -0
VTNP04004 AC103563.1-201ENST00000429316 123 ntBASIC15.05■□□□□ -0
VTNP04004 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC15.05■□□□□ -0
VTNP04004 RN7SL147P-201ENST00000487345 298 ntBASIC15.05■□□□□ -0
VTNP04004 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VTNP04004 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC15.05■□□□□ -0
VTNP04004 SNORA50.1-201ENST00000628590 135 ntBASIC15.05■□□□□ -0
VTNP04004 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VTNP04004 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC15.05■□□□□ -0
VTNP04004 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
VTNP04004 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.05■□□□□ -0
VTNP04004 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
VTNP04004 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
VTNP04004 AC011474.4-201ENST00000623523 2076 ntBASIC15.05■□□□□ -0
VTNP04004 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.05■□□□□ -0
VTNP04004 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VTNP04004 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VTNP04004 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.05■□□□□ -0
VTNP04004 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VTNP04004 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VTNP04004 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
VTNP04004 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
VTNP04004 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.04■□□□□ -0
VTNP04004 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
VTNP04004 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.04■□□□□ -0
VTNP04004 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.04■□□□□ -0
VTNP04004 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
VTNP04004 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.04■□□□□ -0
VTNP04004 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
VTNP04004 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VTNP04004 DDC-212ENST00000615193 1674 ntTSL 3 BASIC15.04■□□□□ -0
VTNP04004 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 PTGER4P2-201ENST00000328411 252 ntBASIC15.04■□□□□ -0
VTNP04004 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.04■□□□□ -0
VTNP04004 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
VTNP04004 AL080243.1-201ENST00000423293 1060 ntBASIC15.04■□□□□ -0
VTNP04004 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.04■□□□□ -0
VTNP04004 PTGER4P3-201ENST00000458150 252 ntBASIC15.04■□□□□ -0
VTNP04004 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
VTNP04004 RPL29P2-202ENST00000498671 657 ntBASIC15.04■□□□□ -0
VTNP04004 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC15.04■□□□□ -0
VTNP04004 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 AC078814.4-201ENST00000546650 327 ntBASIC15.04■□□□□ -0
VTNP04004 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC15.04■□□□□ -0
VTNP04004 DNM1P51-201ENST00000558149 522 ntBASIC15.04■□□□□ -0
VTNP04004 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC15.04■□□□□ -0
VTNP04004 KRT18P8-201ENST00000581937 1246 ntBASIC15.04■□□□□ -0
VTNP04004 TYMSP2-201ENST00000589501 424 ntBASIC15.04■□□□□ -0
VTNP04004 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC15.04■□□□□ -0
VTNP04004 AC006548.2-201ENST00000605217 529 ntBASIC15.04■□□□□ -0
VTNP04004 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC15.04■□□□□ -0
VTNP04004 ETV2-207ENST00000619399 994 ntTSL 5 BASIC15.04■□□□□ -0
VTNP04004 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC15.04■□□□□ -0
VTNP04004 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.04■□□□□ -0
VTNP04004 AC139713.2-207ENST00000641556 1292 ntBASIC15.04■□□□□ -0
VTNP04004 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.04■□□□□ -0
VTNP04004 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.04■□□□□ -0
VTNP04004 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
VTNP04004 AL136379.1-201ENST00000623471 2642 ntBASIC15.04■□□□□ -0
VTNP04004 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VTNP04004 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.04■□□□□ -0
VTNP04004 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 CR383656.2-201ENST00000548656 2254 ntBASIC15.04■□□□□ -0
VTNP04004 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VTNP04004 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms