Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.39□□□□□ -0.43
APOA1P02647 AP005019.2-201ENST00000615104 511 ntBASIC12.39□□□□□ -0.43
APOA1P02647 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.39□□□□□ -0.43
APOA1P02647 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.39□□□□□ -0.43
APOA1P02647 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOA1P02647 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
APOA1P02647 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.38□□□□□ -0.43
APOA1P02647 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.38□□□□□ -0.43
APOA1P02647 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
APOA1P02647 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
APOA1P02647 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
APOA1P02647 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC12.38□□□□□ -0.43
APOA1P02647 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
APOA1P02647 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
APOA1P02647 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.38□□□□□ -0.43
APOA1P02647 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
APOA1P02647 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.38□□□□□ -0.43
APOA1P02647 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.38□□□□□ -0.43
APOA1P02647 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.38□□□□□ -0.43
APOA1P02647 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.38□□□□□ -0.43
APOA1P02647 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.38□□□□□ -0.43
APOA1P02647 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
APOA1P02647 AC002472.3-201ENST00000640124 621 ntBASIC12.38□□□□□ -0.43
APOA1P02647 SHROOM2P1-201ENST00000434773 2384 ntBASIC12.38□□□□□ -0.43
APOA1P02647 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
APOA1P02647 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
APOA1P02647 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 CTAGE10P-201ENST00000318353 2408 ntBASIC12.38□□□□□ -0.43
APOA1P02647 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.38□□□□□ -0.43
APOA1P02647 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOA1P02647 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.37□□□□□ -0.43
APOA1P02647 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.37□□□□□ -0.43
APOA1P02647 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC12.37□□□□□ -0.43
APOA1P02647 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
APOA1P02647 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.37□□□□□ -0.43
APOA1P02647 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.37□□□□□ -0.43
APOA1P02647 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC12.37□□□□□ -0.43
APOA1P02647 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC12.37□□□□□ -0.43
APOA1P02647 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
APOA1P02647 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
APOA1P02647 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOA1P02647 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
APOA1P02647 C1QBPP1-201ENST00000400117 770 ntBASIC12.37□□□□□ -0.43
APOA1P02647 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.37□□□□□ -0.43
APOA1P02647 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms