Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CREB3O43889 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CREB3O43889 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.54□□□□□ -0.08
CREB3O43889 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CREB3O43889 KRT8P43-201ENST00000406052 1458 ntBASIC14.54□□□□□ -0.08
CREB3O43889 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.54□□□□□ -0.08
CREB3O43889 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CREB3O43889 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CREB3O43889 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.54□□□□□ -0.08
CREB3O43889 MARK2P16-201ENST00000605714 1723 ntBASIC14.54□□□□□ -0.08
CREB3O43889 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CREB3O43889 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.54□□□□□ -0.08
CREB3O43889 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.54□□□□□ -0.08
CREB3O43889 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CREB3O43889 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CREB3O43889 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CREB3O43889 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CREB3O43889 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.54□□□□□ -0.08
CREB3O43889 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CREB3O43889 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CREB3O43889 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CREB3O43889 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CREB3O43889 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CREB3O43889 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CREB3O43889 AC106818.1-201ENST00000623223 3242 ntBASIC14.53□□□□□ -0.08
CREB3O43889 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.53□□□□□ -0.08
CREB3O43889 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CREB3O43889 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CREB3O43889 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CREB3O43889 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.53□□□□□ -0.08
CREB3O43889 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.53□□□□□ -0.08
CREB3O43889 AC073548.1-201ENST00000624088 1882 ntBASIC14.53□□□□□ -0.08
CREB3O43889 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.53□□□□□ -0.08
CREB3O43889 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CREB3O43889 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.53□□□□□ -0.08
CREB3O43889 AC004554.1-201ENST00000422830 1468 ntBASIC14.53□□□□□ -0.08
CREB3O43889 KRT8P31-201ENST00000504812 1408 ntBASIC14.53□□□□□ -0.08
CREB3O43889 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 AL583805.1-201ENST00000391389 531 ntBASIC14.53□□□□□ -0.08
CREB3O43889 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.53□□□□□ -0.08
CREB3O43889 AC114947.1-202ENST00000514136 344 ntBASIC14.53□□□□□ -0.08
CREB3O43889 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.53□□□□□ -0.08
CREB3O43889 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.53□□□□□ -0.08
CREB3O43889 AC012044.1-201ENST00000603431 297 ntBASIC14.53□□□□□ -0.08
CREB3O43889 AC007326.1-201ENST00000604539 458 ntBASIC14.53□□□□□ -0.08
CREB3O43889 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.53□□□□□ -0.08
CREB3O43889 AC138627.1-207ENST00000641560 1006 ntBASIC14.53□□□□□ -0.08
CREB3O43889 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CREB3O43889 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CREB3O43889 AC011700.1-201ENST00000610409 2627 ntBASIC14.53□□□□□ -0.08
CREB3O43889 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.53□□□□□ -0.08
CREB3O43889 AGAP12P-201ENST00000585227 2359 ntBASIC14.53□□□□□ -0.08
CREB3O43889 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CREB3O43889 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
CREB3O43889 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CREB3O43889 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CREB3O43889 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CREB3O43889 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CREB3O43889 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CREB3O43889 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.52□□□□□ -0.08
CREB3O43889 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.52□□□□□ -0.08
CREB3O43889 AC093462.1-201ENST00000621167 1683 ntBASIC14.52□□□□□ -0.08
CREB3O43889 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CREB3O43889 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CREB3O43889 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.52□□□□□ -0.08
CREB3O43889 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CREB3O43889 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
CREB3O43889 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CREB3O43889 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CREB3O43889 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CREB3O43889 AP001972.5-201ENST00000624624 2338 ntBASIC14.52□□□□□ -0.08
CREB3O43889 FAM90A2P-201ENST00000511144 1395 ntBASIC14.52□□□□□ -0.08
CREB3O43889 FAM90A25P-201ENST00000528404 1395 ntBASIC14.52□□□□□ -0.08
CREB3O43889 CAP2P1-201ENST00000557743 1390 ntBASIC14.52□□□□□ -0.08
CREB3O43889 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.52□□□□□ -0.08
CREB3O43889 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms