Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
RAB40CQ96S21 AC093462.1-201ENST00000621167 1683 ntBASIC11.3□□□□□ -0.6
RAB40CQ96S21 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
RAB40CQ96S21 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 AL031432.4-201ENST00000641729 2190 ntBASIC11.29□□□□□ -0.6
RAB40CQ96S21 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 C2orf27AP3-201ENST00000434123 579 ntBASIC11.29□□□□□ -0.6
RAB40CQ96S21 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 AL355994.2-201ENST00000447882 704 ntBASIC11.29□□□□□ -0.6
RAB40CQ96S21 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 AC073413.1-201ENST00000603927 732 ntBASIC11.29□□□□□ -0.6
RAB40CQ96S21 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.29□□□□□ -0.6
RAB40CQ96S21 AL354718.3-201ENST00000616414 581 ntBASIC11.29□□□□□ -0.6
RAB40CQ96S21 CR382287.1-201ENST00000623954 586 ntBASIC11.29□□□□□ -0.6
RAB40CQ96S21 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 AR-208ENST00000612452 10676 ntTSL 5 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB40CQ96S21 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RAB40CQ96S21 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB40CQ96S21 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB40CQ96S21 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms