Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 SIRPB3P-201ENST00000340424 1216 ntBASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 U3.5-201ENST00000363448 216 ntBASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 AC092570.1-201ENST00000414446 469 ntBASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 CSTP2-201ENST00000610599 398 ntBASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SYNGAP1Q96PV0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 AC007326.2-201ENST00000624224 7579 ntBASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 AL157996.1-201ENST00000624684 2299 ntBASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 OR10N1P-201ENST00000392758 869 ntBASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 SEPHS2P1-201ENST00000511618 1162 ntBASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC15.66■□□□□ 0.1
SYNGAP1Q96PV0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.65■□□□□ 0.1
SYNGAP1Q96PV0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms