Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 RHPN1-AS1-201ENST00000518049 1918 ntBASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL22A1Q8NFW1 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 IGKV6-21-201ENST00000390256 406 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 SLC25A6P1-201ENST00000412123 775 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 OR7E37P-201ENST00000421076 897 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 P2RX6P-202ENST00000450626 357 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 CTSLP1-201ENST00000457530 1002 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 RAD52-212ENST00000541619 560 ntTSL 4 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 SRGAP3-AS2-203ENST00000600323 1294 ntTSL 5 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 AL356423.1-201ENST00000604953 538 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 PRSS2-206ENST00000633969 852 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 AL513478.3-201ENST00000641038 1095 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 AC016397.2-201ENST00000624848 1985 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 TXNRD3NB-201ENST00000404489 738 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 MIR646HG-204ENST00000427820 805 ntTSL 5 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 AC007992.1-201ENST00000513953 953 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 OR10V2P-201ENST00000525296 764 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 MPI-212ENST00000565576 1148 ntTSL 2 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 RN7SL624P-201ENST00000580297 278 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 AC015936.1-201ENST00000591013 1028 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 AC245884.8-201ENST00000599382 880 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 AC092471.1-202ENST00000637160 999 ntBASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 CGREF1-209ENST00000640154 336 ntTSL 5 BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL22A1Q8NFW1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 PRKCE-202ENST00000394874 996 ntTSL 3 BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 FAM45BP-201ENST00000408950 1074 ntBASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 AC010240.1-201ENST00000429606 459 ntBASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 RPSAP19-201ENST00000431241 880 ntBASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 RN7SL225P-201ENST00000464648 298 ntBASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 AP003717.2-201ENST00000534962 898 ntBASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 AC090236.1-201ENST00000590318 768 ntTSL 2 BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 AL355353.1-201ENST00000604014 330 ntBASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.53■□□□□ 0.4
COL22A1Q8NFW1 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC17.52■□□□□ 0.4
COL22A1Q8NFW1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.52■□□□□ 0.4
COL22A1Q8NFW1 RNA5SP248-201ENST00000365602 127 ntBASIC17.52■□□□□ 0.4
COL22A1Q8NFW1 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
COL22A1Q8NFW1 ACP1-207ENST00000439645 605 ntTSL 2 BASIC17.52■□□□□ 0.4
COL22A1Q8NFW1 RPS15P5-201ENST00000449885 432 ntBASIC17.52■□□□□ 0.4
COL22A1Q8NFW1 PTDSS1-206ENST00000522072 1112 ntTSL 2 BASIC17.52■□□□□ 0.4
COL22A1Q8NFW1 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms