Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 AL356653.1-201ENST00000402743 360 ntBASIC13.15□□□□□ -0.3
RIF1Q5UIP0 TRAIP-202ENST00000469027 1145 ntTSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 AC233724.7-201ENST00000511476 253 ntBASIC13.15□□□□□ -0.3
RIF1Q5UIP0 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 IGHV3-60-201ENST00000521678 354 ntBASIC13.15□□□□□ -0.3
RIF1Q5UIP0 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 AL031587.5-201ENST00000624344 1849 ntBASIC13.15□□□□□ -0.3
RIF1Q5UIP0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 RN7SL16P-201ENST00000476316 269 ntBASIC13.15□□□□□ -0.3
RIF1Q5UIP0 CMC2-202ENST00000486645 766 ntTSL 3 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 PEBP1P1-201ENST00000554856 510 ntBASIC13.15□□□□□ -0.3
RIF1Q5UIP0 WSB1-213ENST00000583193 552 ntTSL 4 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 AC005336.1-201ENST00000585431 1243 ntBASIC13.15□□□□□ -0.3
RIF1Q5UIP0 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
RIF1Q5UIP0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
RIF1Q5UIP0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RIF1Q5UIP0 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.14□□□□□ -0.31
RIF1Q5UIP0 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 AP000437.1-201ENST00000624057 2085 ntBASIC13.14□□□□□ -0.31
RIF1Q5UIP0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 AC016304.1-201ENST00000476363 413 ntBASIC13.14□□□□□ -0.31
RIF1Q5UIP0 HNRNPA1P4-201ENST00000509706 756 ntBASIC13.14□□□□□ -0.31
RIF1Q5UIP0 DNM1P17-201ENST00000512082 426 ntBASIC13.14□□□□□ -0.31
RIF1Q5UIP0 AL049871.1-201ENST00000557475 880 ntTSL 5 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 RPS9-213ENST00000626547 476 ntTSL 2 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 MYO15B-237ENST00000642007 4893 ntBASIC13.14□□□□□ -0.31
RIF1Q5UIP0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 AC005822.1-201ENST00000414124 1034 ntBASIC13.14□□□□□ -0.31
RIF1Q5UIP0 EEF1GP2-201ENST00000509352 1243 ntBASIC13.14□□□□□ -0.31
RIF1Q5UIP0 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 AL022313.4-201ENST00000562756 2046 ntBASIC13.14□□□□□ -0.31
RIF1Q5UIP0 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIF1Q5UIP0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RIF1Q5UIP0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RIF1Q5UIP0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RIF1Q5UIP0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RIF1Q5UIP0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.13□□□□□ -0.31
RIF1Q5UIP0 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms