Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.91□□□□□ -0.18
AP1S1P61966 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
AP1S1P61966 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S1P61966 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC13.91□□□□□ -0.18
AP1S1P61966 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 LINC00638-201ENST00000555578 2518 ntBASIC13.91□□□□□ -0.18
AP1S1P61966 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AP1S1P61966 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.91□□□□□ -0.18
AP1S1P61966 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
AP1S1P61966 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S1P61966 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
AP1S1P61966 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S1P61966 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S1P61966 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
AP1S1P61966 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S1P61966 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S1P61966 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.9□□□□□ -0.18
AP1S1P61966 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
AP1S1P61966 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S1P61966 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.9□□□□□ -0.18
AP1S1P61966 RN7SL23P-201ENST00000484055 275 ntBASIC13.9□□□□□ -0.18
AP1S1P61966 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.9□□□□□ -0.18
AP1S1P61966 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
AP1S1P61966 MIR4706-201ENST00000582134 82 ntBASIC13.9□□□□□ -0.18
AP1S1P61966 RN7SL190P-201ENST00000582519 257 ntBASIC13.9□□□□□ -0.18
AP1S1P61966 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC13.9□□□□□ -0.18
AP1S1P61966 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC13.9□□□□□ -0.18
AP1S1P61966 MIR8071-1-201ENST00000616769 65 ntBASIC13.9□□□□□ -0.18
AP1S1P61966 MIR8071-2-201ENST00000616772 65 ntBASIC13.9□□□□□ -0.18
AP1S1P61966 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 ERG-211ENST00000453032 1595 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S1P61966 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S1P61966 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 AL513497.1-201ENST00000624273 2083 ntBASIC13.9□□□□□ -0.18
AP1S1P61966 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S1P61966 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.9□□□□□ -0.18
AP1S1P61966 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.9□□□□□ -0.18
AP1S1P61966 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AP1S1P61966 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.9□□□□□ -0.18
AP1S1P61966 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
AP1S1P61966 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
AP1S1P61966 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
AP1S1P61966 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.89□□□□□ -0.19
AP1S1P61966 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.89□□□□□ -0.19
AP1S1P61966 ACTG1P19-201ENST00000418987 1116 ntBASIC13.89□□□□□ -0.19
AP1S1P61966 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 AC079250.1-201ENST00000456046 531 ntBASIC13.89□□□□□ -0.19
AP1S1P61966 RPS2P36-201ENST00000456516 831 ntBASIC13.89□□□□□ -0.19
AP1S1P61966 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 AC132812.1-201ENST00000583145 892 ntBASIC13.89□□□□□ -0.19
AP1S1P61966 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.89□□□□□ -0.19
AP1S1P61966 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.89□□□□□ -0.19
AP1S1P61966 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.89□□□□□ -0.19
AP1S1P61966 AC011491.1-203ENST00000637688 543 ntBASIC13.89□□□□□ -0.19
AP1S1P61966 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
AP1S1P61966 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.89□□□□□ -0.19
AP1S1P61966 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
AP1S1P61966 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms