Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC13.16□□□□□ -0.3
CLK1P49759 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.16□□□□□ -0.3
CLK1P49759 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CLK1P49759 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.16□□□□□ -0.3
CLK1P49759 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CLK1P49759 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.16□□□□□ -0.3
CLK1P49759 AC244394.1-201ENST00000435000 1665 ntBASIC13.16□□□□□ -0.3
CLK1P49759 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.16□□□□□ -0.3
CLK1P49759 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLK1P49759 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.16□□□□□ -0.3
CLK1P49759 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.16□□□□□ -0.3
CLK1P49759 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.16□□□□□ -0.3
CLK1P49759 RPSAP36-202ENST00000494591 1261 ntBASIC13.16□□□□□ -0.3
CLK1P49759 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.16□□□□□ -0.3
CLK1P49759 RBM8B-201ENST00000555532 525 ntBASIC13.16□□□□□ -0.3
CLK1P49759 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
CLK1P49759 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.16□□□□□ -0.3
CLK1P49759 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.16□□□□□ -0.3
CLK1P49759 AP000346.4-201ENST00000614827 381 ntBASIC13.16□□□□□ -0.3
CLK1P49759 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLK1P49759 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CLK1P49759 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CLK1P49759 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CLK1P49759 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.16□□□□□ -0.3
CLK1P49759 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.16□□□□□ -0.3
CLK1P49759 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.16□□□□□ -0.3
CLK1P49759 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLK1P49759 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.16□□□□□ -0.3
CLK1P49759 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CLK1P49759 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CLK1P49759 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 AL645937.6-201ENST00000641122 3727 ntBASIC13.15□□□□□ -0.3
CLK1P49759 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.15□□□□□ -0.3
CLK1P49759 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CLK1P49759 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLK1P49759 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CLK1P49759 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CLK1P49759 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.15□□□□□ -0.3
CLK1P49759 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
CLK1P49759 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.15□□□□□ -0.3
CLK1P49759 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 MIR663B-201ENST00000408361 115 ntBASIC13.15□□□□□ -0.3
CLK1P49759 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.15□□□□□ -0.3
CLK1P49759 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.15□□□□□ -0.3
CLK1P49759 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.15□□□□□ -0.3
CLK1P49759 AL161932.2-201ENST00000435436 679 ntBASIC13.15□□□□□ -0.3
CLK1P49759 POM121L10P-201ENST00000436994 1285 ntBASIC13.15□□□□□ -0.3
CLK1P49759 RPS2P32-201ENST00000439199 892 ntBASIC13.15□□□□□ -0.3
CLK1P49759 AL645933.1-201ENST00000440087 609 ntBASIC13.15□□□□□ -0.3
CLK1P49759 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.15□□□□□ -0.3
CLK1P49759 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.15□□□□□ -0.3
CLK1P49759 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 FAM86HP-204ENST00000513466 959 ntBASIC13.15□□□□□ -0.3
CLK1P49759 FAM8A2P-201ENST00000528813 1142 ntBASIC13.15□□□□□ -0.3
CLK1P49759 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.15□□□□□ -0.3
CLK1P49759 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.15□□□□□ -0.3
CLK1P49759 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLK1P49759 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.15□□□□□ -0.3
CLK1P49759 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.15□□□□□ -0.3
CLK1P49759 AC104506.1-201ENST00000609247 429 ntBASIC13.15□□□□□ -0.3
CLK1P49759 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CLK1P49759 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLK1P49759 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms