Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC16.36■□□□□ 0.21
TNNI2P48788 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC16.36■□□□□ 0.21
TNNI2P48788 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.36■□□□□ 0.21
TNNI2P48788 AC026120.2-201ENST00000617239 309 ntBASIC16.36■□□□□ 0.21
TNNI2P48788 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC16.36■□□□□ 0.21
TNNI2P48788 MEP1AP1-201ENST00000636082 1097 ntBASIC16.36■□□□□ 0.21
TNNI2P48788 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 GUCY2EP-203ENST00000531117 1918 ntBASIC16.36■□□□□ 0.21
TNNI2P48788 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.36■□□□□ 0.21
TNNI2P48788 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TNNI2P48788 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC16.36■□□□□ 0.21
TNNI2P48788 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC16.36■□□□□ 0.21
TNNI2P48788 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TNNI2P48788 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNNI2P48788 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNNI2P48788 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNNI2P48788 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.35■□□□□ 0.21
TNNI2P48788 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNNI2P48788 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TNNI2P48788 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TNNI2P48788 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TNNI2P48788 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TNNI2P48788 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TNNI2P48788 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNNI2P48788 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TNNI2P48788 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TNNI2P48788 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNNI2P48788 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.35■□□□□ 0.21
TNNI2P48788 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TNNI2P48788 RNA5SP491-201ENST00000362936 118 ntBASIC16.35■□□□□ 0.21
TNNI2P48788 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.35■□□□□ 0.21
TNNI2P48788 OR7E155P-201ENST00000412208 1014 ntBASIC16.35■□□□□ 0.21
TNNI2P48788 CDCA4P4-201ENST00000435216 680 ntBASIC16.35■□□□□ 0.21
TNNI2P48788 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC16.35■□□□□ 0.21
TNNI2P48788 VDAC1P11-201ENST00000458323 852 ntBASIC16.35■□□□□ 0.21
TNNI2P48788 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC16.35■□□□□ 0.21
TNNI2P48788 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC16.35■□□□□ 0.21
TNNI2P48788 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNNI2P48788 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC16.35■□□□□ 0.21
TNNI2P48788 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC16.35■□□□□ 0.21
TNNI2P48788 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.35■□□□□ 0.21
TNNI2P48788 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNNI2P48788 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
TNNI2P48788 AC020931.1-201ENST00000589622 1346 ntBASIC16.35■□□□□ 0.21
TNNI2P48788 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TNNI2P48788 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TNNI2P48788 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.35■□□□□ 0.21
TNNI2P48788 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TNNI2P48788 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TNNI2P48788 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TNNI2P48788 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.35■□□□□ 0.21
TNNI2P48788 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.34■□□□□ 0.21
TNNI2P48788 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TNNI2P48788 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TNNI2P48788 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.34■□□□□ 0.21
TNNI2P48788 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.34■□□□□ 0.21
TNNI2P48788 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TNNI2P48788 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC16.34■□□□□ 0.21
TNNI2P48788 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TNNI2P48788 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.34■□□□□ 0.21
TNNI2P48788 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC16.34■□□□□ 0.21
TNNI2P48788 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TNNI2P48788 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC16.34■□□□□ 0.21
TNNI2P48788 AC112250.1-201ENST00000504640 745 ntBASIC16.34■□□□□ 0.21
TNNI2P48788 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC16.34■□□□□ 0.21
TNNI2P48788 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.34■□□□□ 0.21
TNNI2P48788 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC16.34■□□□□ 0.21
TNNI2P48788 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.34■□□□□ 0.21
TNNI2P48788 BAP1-211ENST00000615113 489 ntBASIC16.34■□□□□ 0.21
TNNI2P48788 AC048382.6-201ENST00000621980 1223 ntBASIC16.34■□□□□ 0.21
TNNI2P48788 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.34■□□□□ 0.21
TNNI2P48788 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.34■□□□□ 0.21
TNNI2P48788 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.34■□□□□ 0.21
TNNI2P48788 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
TNNI2P48788 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TNNI2P48788 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
TNNI2P48788 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC16.34■□□□□ 0.21
TNNI2P48788 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms