Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM23P36406 AC020917.4-201ENST00000623994 1999 ntBASIC13.6□□□□□ -0.23
TRIM23P36406 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM23P36406 AL139385.1-201ENST00000611744 3272 ntBASIC13.59□□□□□ -0.23
TRIM23P36406 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRIM23P36406 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM23P36406 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM23P36406 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRIM23P36406 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM23P36406 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRIM23P36406 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 MARK2P9-201ENST00000430958 1727 ntBASIC13.59□□□□□ -0.23
TRIM23P36406 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM23P36406 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRIM23P36406 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM23P36406 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRIM23P36406 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM23P36406 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 FAM21EP-201ENST00000417804 985 ntBASIC13.59□□□□□ -0.23
TRIM23P36406 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC13.59□□□□□ -0.23
TRIM23P36406 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM23P36406 AC041040.1-201ENST00000425197 460 ntBASIC13.59□□□□□ -0.23
TRIM23P36406 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM23P36406 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.59□□□□□ -0.23
TRIM23P36406 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM23P36406 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM23P36406 AC026120.2-201ENST00000617239 309 ntBASIC13.59□□□□□ -0.23
TRIM23P36406 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM23P36406 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRIM23P36406 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRIM23P36406 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRIM23P36406 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.59□□□□□ -0.23
TRIM23P36406 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 AC072061.1-201ENST00000569710 2234 ntBASIC13.59□□□□□ -0.23
TRIM23P36406 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRIM23P36406 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM23P36406 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM23P36406 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM23P36406 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM23P36406 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM23P36406 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM23P36406 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM23P36406 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
TRIM23P36406 AL672207.1-201ENST00000328462 1570 ntBASIC13.58□□□□□ -0.23
TRIM23P36406 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.58□□□□□ -0.23
TRIM23P36406 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM23P36406 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.58□□□□□ -0.23
TRIM23P36406 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
TRIM23P36406 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM23P36406 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM23P36406 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TRIM23P36406 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM23P36406 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM23P36406 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM23P36406 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRIM23P36406 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM23P36406 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM23P36406 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRIM23P36406 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRIM23P36406 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM23P36406 AQP7P5-201ENST00000428759 1049 ntBASIC13.58□□□□□ -0.24
TRIM23P36406 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.58□□□□□ -0.24
TRIM23P36406 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.58□□□□□ -0.24
TRIM23P36406 AQP7P4-201ENST00000447083 1042 ntBASIC13.58□□□□□ -0.24
TRIM23P36406 AL135901.1-201ENST00000451812 333 ntBASIC13.58□□□□□ -0.24
TRIM23P36406 AQP7P2-201ENST00000453967 1041 ntBASIC13.58□□□□□ -0.24
TRIM23P36406 GULOP-201ENST00000454030 748 ntBASIC13.58□□□□□ -0.24
TRIM23P36406 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.58□□□□□ -0.24
TRIM23P36406 AC093909.3-201ENST00000504783 336 ntBASIC13.58□□□□□ -0.24
TRIM23P36406 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.58□□□□□ -0.24
TRIM23P36406 AC090136.2-201ENST00000517809 420 ntBASIC13.58□□□□□ -0.24
TRIM23P36406 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
TRIM23P36406 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.58□□□□□ -0.24
TRIM23P36406 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.58□□□□□ -0.24
TRIM23P36406 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.58□□□□□ -0.24
TRIM23P36406 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM23P36406 AC010976.2-201ENST00000609697 852 ntBASIC13.58□□□□□ -0.24
TRIM23P36406 MIR6746-201ENST00000620971 63 ntBASIC13.58□□□□□ -0.24
TRIM23P36406 AQP7P3-201ENST00000624547 1041 ntBASIC13.58□□□□□ -0.24
TRIM23P36406 AC127024.7-201ENST00000625101 200 ntBASIC13.58□□□□□ -0.24
TRIM23P36406 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms