Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.79□□□□□ -0.2
VARSP26640 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
VARSP26640 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.79□□□□□ -0.2
VARSP26640 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VARSP26640 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VARSP26640 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.79□□□□□ -0.2
VARSP26640 RPS6P14-201ENST00000425165 719 ntBASIC13.79□□□□□ -0.2
VARSP26640 AL353637.1-201ENST00000451571 732 ntBASIC13.79□□□□□ -0.2
VARSP26640 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.79□□□□□ -0.2
VARSP26640 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC13.79□□□□□ -0.2
VARSP26640 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.79□□□□□ -0.2
VARSP26640 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 AC013355.1-201ENST00000562625 723 ntBASIC13.79□□□□□ -0.2
VARSP26640 RN7SL774P-201ENST00000577467 290 ntBASIC13.79□□□□□ -0.2
VARSP26640 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.79□□□□□ -0.2
VARSP26640 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.79□□□□□ -0.2
VARSP26640 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.79□□□□□ -0.2
VARSP26640 AL157813.1-201ENST00000612996 587 ntBASIC13.79□□□□□ -0.2
VARSP26640 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.79□□□□□ -0.2
VARSP26640 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC13.79□□□□□ -0.2
VARSP26640 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.79□□□□□ -0.2
VARSP26640 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.79□□□□□ -0.2
VARSP26640 LINC00115-201ENST00000473798 1317 ntBASIC13.79□□□□□ -0.2
VARSP26640 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.79□□□□□ -0.2
VARSP26640 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.79□□□□□ -0.2
VARSP26640 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VARSP26640 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
VARSP26640 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VARSP26640 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.79□□□□□ -0.2
VARSP26640 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.79□□□□□ -0.2
VARSP26640 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 PCDHB18P-202ENST00000526308 3197 ntBASIC13.79□□□□□ -0.2
VARSP26640 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.79□□□□□ -0.2
VARSP26640 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VARSP26640 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.78□□□□□ -0.2
VARSP26640 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
VARSP26640 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
VARSP26640 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
VARSP26640 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.78□□□□□ -0.2
VARSP26640 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VARSP26640 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
VARSP26640 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VARSP26640 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.78□□□□□ -0.2
VARSP26640 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.78□□□□□ -0.2
VARSP26640 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.78□□□□□ -0.2
VARSP26640 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.78□□□□□ -0.2
VARSP26640 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.78□□□□□ -0.2
VARSP26640 AC007274.2-201ENST00000421675 662 ntBASIC13.78□□□□□ -0.2
VARSP26640 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.78□□□□□ -0.2
VARSP26640 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.78□□□□□ -0.2
VARSP26640 SPTLC1P5-201ENST00000450718 252 ntBASIC13.78□□□□□ -0.2
VARSP26640 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.78□□□□□ -0.2
VARSP26640 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.78□□□□□ -0.2
VARSP26640 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.78□□□□□ -0.2
VARSP26640 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.78□□□□□ -0.2
VARSP26640 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC13.78□□□□□ -0.2
VARSP26640 AC026616.1-201ENST00000523157 525 ntBASIC13.78□□□□□ -0.2
VARSP26640 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.78□□□□□ -0.2
VARSP26640 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.78□□□□□ -0.2
VARSP26640 MIR3907-201ENST00000579424 151 ntBASIC13.78□□□□□ -0.2
VARSP26640 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.78□□□□□ -0.2
VARSP26640 AL132994.2-201ENST00000603120 687 ntBASIC13.78□□□□□ -0.2
VARSP26640 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.78□□□□□ -0.2
VARSP26640 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.78□□□□□ -0.2
VARSP26640 AC007952.5-201ENST00000572818 1486 ntBASIC13.78□□□□□ -0.2
VARSP26640 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VARSP26640 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms