Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC14.05□□□□□ -0.16
CCND1P24385 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 LINC01165-201ENST00000445190 1623 ntBASIC14.05□□□□□ -0.16
CCND1P24385 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC14.05□□□□□ -0.16
CCND1P24385 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 AC144522.1-201ENST00000625111 1658 ntBASIC14.05□□□□□ -0.16
CCND1P24385 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CCND1P24385 AL645937.6-201ENST00000641122 3727 ntBASIC14.05□□□□□ -0.16
CCND1P24385 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.05□□□□□ -0.16
CCND1P24385 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.05□□□□□ -0.16
CCND1P24385 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CCND1P24385 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.05□□□□□ -0.16
CCND1P24385 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.05□□□□□ -0.16
CCND1P24385 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.05□□□□□ -0.16
CCND1P24385 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.05□□□□□ -0.16
CCND1P24385 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.05□□□□□ -0.16
CCND1P24385 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.05□□□□□ -0.16
CCND1P24385 FAM8A2P-201ENST00000528813 1142 ntBASIC14.05□□□□□ -0.16
CCND1P24385 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.05□□□□□ -0.16
CCND1P24385 AC005962.1-201ENST00000584100 773 ntBASIC14.05□□□□□ -0.16
CCND1P24385 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 AL096828.3-201ENST00000615354 462 ntBASIC14.05□□□□□ -0.16
CCND1P24385 AL136295.7-201ENST00000619226 1200 ntBASIC14.05□□□□□ -0.16
CCND1P24385 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.05□□□□□ -0.16
CCND1P24385 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.05□□□□□ -0.16
CCND1P24385 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CCND1P24385 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
CCND1P24385 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CCND1P24385 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 LAP3P2-201ENST00000454686 1454 ntBASIC14.05□□□□□ -0.16
CCND1P24385 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CCND1P24385 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCND1P24385 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCND1P24385 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CCND1P24385 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC14.05□□□□□ -0.16
CCND1P24385 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCND1P24385 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CCND1P24385 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 AC026992.2-203ENST00000563004 2419 ntBASIC14.04□□□□□ -0.16
CCND1P24385 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.04□□□□□ -0.16
CCND1P24385 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CCND1P24385 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.04□□□□□ -0.16
CCND1P24385 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCND1P24385 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.04□□□□□ -0.16
CCND1P24385 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 USP17L6P-201ENST00000382470 1197 ntBASIC14.04□□□□□ -0.16
CCND1P24385 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CCND1P24385 KLF2P1-201ENST00000447438 1042 ntBASIC14.04□□□□□ -0.16
CCND1P24385 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.04□□□□□ -0.16
CCND1P24385 AL591846.1-201ENST00000451736 433 ntBASIC14.04□□□□□ -0.16
CCND1P24385 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.04□□□□□ -0.16
CCND1P24385 AC006122.1-201ENST00000493323 440 ntBASIC14.04□□□□□ -0.16
CCND1P24385 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.04□□□□□ -0.16
CCND1P24385 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.04□□□□□ -0.16
CCND1P24385 AL160314.3-201ENST00000556041 767 ntBASIC14.04□□□□□ -0.16
CCND1P24385 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.04□□□□□ -0.16
CCND1P24385 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.04□□□□□ -0.16
CCND1P24385 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.04□□□□□ -0.16
CCND1P24385 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.04□□□□□ -0.16
CCND1P24385 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.04□□□□□ -0.16
CCND1P24385 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.04□□□□□ -0.16
CCND1P24385 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC14.04□□□□□ -0.16
CCND1P24385 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCND1P24385 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms