Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
XPAP23025 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.03□□□□□ -0.16
XPAP23025 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.02□□□□□ -0.16
XPAP23025 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
XPAP23025 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
XPAP23025 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
XPAP23025 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
XPAP23025 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
XPAP23025 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
XPAP23025 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
XPAP23025 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.02□□□□□ -0.16
XPAP23025 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
XPAP23025 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
XPAP23025 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
XPAP23025 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
XPAP23025 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
XPAP23025 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
XPAP23025 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
XPAP23025 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
XPAP23025 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.02□□□□□ -0.17
XPAP23025 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.02□□□□□ -0.17
XPAP23025 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
XPAP23025 OR2W2P-201ENST00000406313 909 ntBASIC14.02□□□□□ -0.17
XPAP23025 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.02□□□□□ -0.17
XPAP23025 DPY19L2P5-201ENST00000456300 331 ntBASIC14.02□□□□□ -0.17
XPAP23025 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.02□□□□□ -0.17
XPAP23025 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.02□□□□□ -0.17
XPAP23025 RNA5SP406-201ENST00000516106 112 ntBASIC14.02□□□□□ -0.17
XPAP23025 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.02□□□□□ -0.17
XPAP23025 CR383656.3-201ENST00000551315 183 ntBASIC14.02□□□□□ -0.17
XPAP23025 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.02□□□□□ -0.17
XPAP23025 KRT18P8-201ENST00000581937 1246 ntBASIC14.02□□□□□ -0.17
XPAP23025 AC140113.1-201ENST00000603467 169 ntBASIC14.02□□□□□ -0.17
XPAP23025 AC007250.1-201ENST00000608934 338 ntBASIC14.02□□□□□ -0.17
XPAP23025 AC073911.3-201ENST00000624401 631 ntBASIC14.02□□□□□ -0.17
XPAP23025 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
XPAP23025 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.02□□□□□ -0.17
XPAP23025 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.02□□□□□ -0.17
XPAP23025 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.02□□□□□ -0.17
XPAP23025 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC14.02□□□□□ -0.17
XPAP23025 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.02□□□□□ -0.17
XPAP23025 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XPAP23025 AC019109.1-201ENST00000401725 1874 ntBASIC14.01□□□□□ -0.17
XPAP23025 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
XPAP23025 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
XPAP23025 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
XPAP23025 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.01□□□□□ -0.17
XPAP23025 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.01□□□□□ -0.17
XPAP23025 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
XPAP23025 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
XPAP23025 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.01□□□□□ -0.17
XPAP23025 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.01□□□□□ -0.17
XPAP23025 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.01□□□□□ -0.17
XPAP23025 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 RN7SL375P-201ENST00000492442 298 ntBASIC14.01□□□□□ -0.17
XPAP23025 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
XPAP23025 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.01□□□□□ -0.17
XPAP23025 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.01□□□□□ -0.17
XPAP23025 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.01□□□□□ -0.17
XPAP23025 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.01□□□□□ -0.17
XPAP23025 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
XPAP23025 MIR4722-201ENST00000578292 60 ntBASIC14.01□□□□□ -0.17
XPAP23025 RN7SL357P-201ENST00000581065 298 ntBASIC14.01□□□□□ -0.17
XPAP23025 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.01□□□□□ -0.17
XPAP23025 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.01□□□□□ -0.17
XPAP23025 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
XPAP23025 MIR6842-201ENST00000612539 65 ntBASIC14.01□□□□□ -0.17
XPAP23025 MIR7845-201ENST00000618396 99 ntBASIC14.01□□□□□ -0.17
XPAP23025 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms