Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CTLA4P16410 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.31□□□□□ -0.44
CTLA4P16410 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.31□□□□□ -0.44
CTLA4P16410 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CTLA4P16410 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.31□□□□□ -0.44
CTLA4P16410 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 FAM86MP-201ENST00000340703 885 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CTLA4P16410 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CTLA4P16410 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.31□□□□□ -0.44
CTLA4P16410 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.31□□□□□ -0.44
CTLA4P16410 PPP1R2P4-201ENST00000424051 595 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.31□□□□□ -0.44
CTLA4P16410 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.31□□□□□ -0.44
CTLA4P16410 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.31□□□□□ -0.44
CTLA4P16410 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.31□□□□□ -0.44
CTLA4P16410 ZNF767P-206ENST00000513792 565 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.31□□□□□ -0.44
CTLA4P16410 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.31□□□□□ -0.44
CTLA4P16410 PHBP15-201ENST00000574228 665 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 MIR3940-201ENST00000579148 102 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 MIR4538-201ENST00000581377 78 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 LINC01783-202ENST00000614408 828 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 MIR6752-201ENST00000618442 71 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 AC091544.8-201ENST00000619490 361 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 BX284668.2-205ENST00000619677 828 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.31□□□□□ -0.44
CTLA4P16410 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
CTLA4P16410 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.31□□□□□ -0.44
CTLA4P16410 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 AP003969.2-201ENST00000623739 2275 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 AL133338.1-201ENST00000565695 1517 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.31□□□□□ -0.44
CTLA4P16410 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CTLA4P16410 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.3□□□□□ -0.44
CTLA4P16410 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
CTLA4P16410 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC12.3□□□□□ -0.44
CTLA4P16410 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.3□□□□□ -0.44
CTLA4P16410 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.3□□□□□ -0.44
CTLA4P16410 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CTLA4P16410 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
CTLA4P16410 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CTLA4P16410 DLX4-206ENST00000611342 1662 ntBASIC12.3□□□□□ -0.44
CTLA4P16410 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 ELK2AP-201ENST00000392510 1007 ntBASIC12.3□□□□□ -0.44
CTLA4P16410 AL008707.1-201ENST00000422498 534 ntBASIC12.3□□□□□ -0.44
CTLA4P16410 RPSAP15-201ENST00000448168 861 ntBASIC12.3□□□□□ -0.44
CTLA4P16410 AC073150.1-201ENST00000450406 1084 ntBASIC12.3□□□□□ -0.44
CTLA4P16410 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.3□□□□□ -0.44
CTLA4P16410 POU5F1P2-201ENST00000521750 823 ntBASIC12.3□□□□□ -0.44
CTLA4P16410 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.3□□□□□ -0.44
CTLA4P16410 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CTLA4P16410 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.3□□□□□ -0.44
CTLA4P16410 AL109837.1-201ENST00000603272 613 ntBASIC12.3□□□□□ -0.44
CTLA4P16410 MIR6869-201ENST00000619434 62 ntBASIC12.3□□□□□ -0.44
CTLA4P16410 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CTLA4P16410 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 PES1P2-201ENST00000449745 1735 ntBASIC12.3□□□□□ -0.44
CTLA4P16410 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.3□□□□□ -0.44
CTLA4P16410 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.3□□□□□ -0.44
CTLA4P16410 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.3□□□□□ -0.44
CTLA4P16410 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CTLA4P16410 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms