Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC23.21■■□□□ 1.31
TOP2AP11388 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TOP2AP11388 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC23.21■■□□□ 1.31
TOP2AP11388 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TOP2AP11388 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TOP2AP11388 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TOP2AP11388 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC23.21■■□□□ 1.31
TOP2AP11388 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC23.21■■□□□ 1.31
TOP2AP11388 RN7SL16P-201ENST00000476316 269 ntBASIC23.21■■□□□ 1.31
TOP2AP11388 AL137779.3-201ENST00000553295 729 ntBASIC23.21■■□□□ 1.31
TOP2AP11388 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC23.21■■□□□ 1.31
TOP2AP11388 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
TOP2AP11388 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TOP2AP11388 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC23.21■■□□□ 1.31
TOP2AP11388 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TOP2AP11388 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TOP2AP11388 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
TOP2AP11388 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TOP2AP11388 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TOP2AP11388 GDA-203ENST00000376986 1771 ntTSL 2 BASIC23.21■■□□□ 1.31
TOP2AP11388 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
TOP2AP11388 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
TOP2AP11388 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
TOP2AP11388 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC23.2■■□□□ 1.31
TOP2AP11388 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
TOP2AP11388 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC23.2■■□□□ 1.31
TOP2AP11388 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
TOP2AP11388 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TOP2AP11388 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC23.2■■□□□ 1.3
TOP2AP11388 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TOP2AP11388 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TOP2AP11388 FTLP16-201ENST00000446400 513 ntBASIC23.2■■□□□ 1.3
TOP2AP11388 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC23.2■■□□□ 1.3
TOP2AP11388 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TOP2AP11388 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC23.2■■□□□ 1.3
TOP2AP11388 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC23.2■■□□□ 1.3
TOP2AP11388 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC23.2■■□□□ 1.3
TOP2AP11388 MIR4309-201ENST00000582498 83 ntBASIC23.2■■□□□ 1.3
TOP2AP11388 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC23.2■■□□□ 1.3
TOP2AP11388 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TOP2AP11388 OR4C3-202ENST00000611380 597 ntBASIC23.2■■□□□ 1.3
TOP2AP11388 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC23.2■■□□□ 1.3
TOP2AP11388 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TOP2AP11388 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TOP2AP11388 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TOP2AP11388 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC23.2■■□□□ 1.3
TOP2AP11388 CDC20P1-201ENST00000488829 1500 ntBASIC23.2■■□□□ 1.3
TOP2AP11388 AC011474.4-201ENST00000623523 2076 ntBASIC23.2■■□□□ 1.3
TOP2AP11388 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TOP2AP11388 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TOP2AP11388 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC23.2■■□□□ 1.3
TOP2AP11388 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
TOP2AP11388 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TOP2AP11388 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC23.2■■□□□ 1.3
TOP2AP11388 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TOP2AP11388 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TOP2AP11388 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TOP2AP11388 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
TOP2AP11388 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
TOP2AP11388 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
TOP2AP11388 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC23.19■■□□□ 1.3
TOP2AP11388 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC23.19■■□□□ 1.3
TOP2AP11388 RN7SKP102-201ENST00000411186 315 ntBASIC23.19■■□□□ 1.3
TOP2AP11388 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC23.19■■□□□ 1.3
TOP2AP11388 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC23.19■■□□□ 1.3
TOP2AP11388 C2orf27AP1-201ENST00000618128 586 ntBASIC23.19■■□□□ 1.3
TOP2AP11388 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TOP2AP11388 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TOP2AP11388 FAM90A12P-201ENST00000519497 2375 ntBASIC23.19■■□□□ 1.3
TOP2AP11388 FAM90A24P-201ENST00000520792 2369 ntBASIC23.19■■□□□ 1.3
TOP2AP11388 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC23.19■■□□□ 1.3
TOP2AP11388 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TOP2AP11388 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TOP2AP11388 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TOP2AP11388 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
TOP2AP11388 TCAF1P1-201ENST00000414990 2232 ntBASIC23.19■■□□□ 1.3
TOP2AP11388 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
TOP2AP11388 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TOP2AP11388 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC23.19■■□□□ 1.3
TOP2AP11388 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TOP2AP11388 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TOP2AP11388 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
TOP2AP11388 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TOP2AP11388 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
TOP2AP11388 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
TOP2AP11388 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TOP2AP11388 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC23.18■■□□□ 1.3
TOP2AP11388 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC23.18■■□□□ 1.3
TOP2AP11388 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TOP2AP11388 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC23.18■■□□□ 1.3
TOP2AP11388 MED11-203ENST00000575284 652 ntTSL 3 BASIC23.18■■□□□ 1.3
TOP2AP11388 AC131274.3-201ENST00000578745 1271 ntBASIC23.18■■□□□ 1.3
TOP2AP11388 HCG18-241ENST00000602290 821 ntTSL 2 BASIC23.18■■□□□ 1.3
TOP2AP11388 MIR6165-201ENST00000614803 84 ntBASIC23.18■■□□□ 1.3
TOP2AP11388 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC23.18■■□□□ 1.3
TOP2AP11388 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 DDC-214ENST00000622873 1839 ntTSL 3 BASIC23.18■■□□□ 1.3
TOP2AP11388 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TOP2AP11388 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms