Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
VTNP04004 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC15.07■□□□□ 0
VTNP04004 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.07■□□□□ 0
VTNP04004 LINC00638-201ENST00000555578 2518 ntBASIC15.07■□□□□ 0
VTNP04004 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC15.07■□□□□ 0
VTNP04004 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
VTNP04004 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
VTNP04004 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.07■□□□□ 0
VTNP04004 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC15.07■□□□□ 0
VTNP04004 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC15.07■□□□□ 0
VTNP04004 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
VTNP04004 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.07■□□□□ 0
VTNP04004 RN7SL128P-201ENST00000467883 305 ntBASIC15.07■□□□□ 0
VTNP04004 RN7SL288P-201ENST00000490496 291 ntBASIC15.07■□□□□ 0
VTNP04004 AC106047.2-201ENST00000511723 743 ntBASIC15.07■□□□□ 0
VTNP04004 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.07■□□□□ 0
VTNP04004 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.07■□□□□ 0
VTNP04004 F11R-204ENST00000537746 1245 ntTSL 2 BASIC15.07■□□□□ 0
VTNP04004 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.07■□□□□ 0
VTNP04004 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 AP005212.2-201ENST00000584979 510 ntBASIC15.07■□□□□ 0
VTNP04004 AL356740.1-201ENST00000602192 1297 ntBASIC15.07■□□□□ 0
VTNP04004 PXK-210ENST00000479241 2817 ntTSL 2 BASIC15.07■□□□□ 0
VTNP04004 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
VTNP04004 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
VTNP04004 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.07■□□□□ 0
VTNP04004 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.07■□□□□ 0
VTNP04004 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
VTNP04004 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
VTNP04004 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.07■□□□□ 0
VTNP04004 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC15.06■□□□□ 0
VTNP04004 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.06■□□□□ 0
VTNP04004 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
VTNP04004 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VTNP04004 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.06■□□□□ 0
VTNP04004 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC15.06■□□□□ 0
VTNP04004 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC15.06■□□□□ 0
VTNP04004 PIFO-201ENST00000369737 746 ntTSL 2 BASIC15.06■□□□□ 0
VTNP04004 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VTNP04004 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 AC104961.1-201ENST00000427605 771 ntBASIC15.06■□□□□ 0
VTNP04004 AC092810.2-201ENST00000431570 362 ntBASIC15.06■□□□□ 0
VTNP04004 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC15.06■□□□□ 0
VTNP04004 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.06■□□□□ 0
VTNP04004 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC15.06■□□□□ 0
VTNP04004 AC244197.1-201ENST00000456494 951 ntBASIC15.06■□□□□ 0
VTNP04004 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.06■□□□□ 0
VTNP04004 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC15.06■□□□□ 0
VTNP04004 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC15.06■□□□□ 0
VTNP04004 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
VTNP04004 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
VTNP04004 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.06■□□□□ 0
VTNP04004 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC15.06■□□□□ 0
VTNP04004 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC15.06■□□□□ 0
VTNP04004 AC072061.1-201ENST00000569710 2234 ntBASIC15.06■□□□□ 0
VTNP04004 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
VTNP04004 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.06■□□□□ 0
VTNP04004 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC15.06■□□□□ 0
VTNP04004 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
VTNP04004 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VTNP04004 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.06■□□□□ 0
VTNP04004 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
VTNP04004 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
VTNP04004 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
VTNP04004 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VTNP04004 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VTNP04004 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.05■□□□□ 0
VTNP04004 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VTNP04004 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VTNP04004 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.05■□□□□ 0
VTNP04004 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
VTNP04004 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms