Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.37□□□□□ -0.43
APOC1P02654 AC135782.3-201ENST00000562782 2105 ntBASIC12.37□□□□□ -0.43
APOC1P02654 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC1P02654 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
APOC1P02654 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.37□□□□□ -0.43
APOC1P02654 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
APOC1P02654 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
APOC1P02654 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC1P02654 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.37□□□□□ -0.43
APOC1P02654 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 EIF4HP1-201ENST00000453115 687 ntBASIC12.37□□□□□ -0.43
APOC1P02654 RNMTL1P1-201ENST00000454103 560 ntBASIC12.37□□□□□ -0.43
APOC1P02654 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.37□□□□□ -0.43
APOC1P02654 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.37□□□□□ -0.43
APOC1P02654 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.37□□□□□ -0.43
APOC1P02654 FAM8A2P-201ENST00000528813 1142 ntBASIC12.37□□□□□ -0.43
APOC1P02654 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.37□□□□□ -0.43
APOC1P02654 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.37□□□□□ -0.43
APOC1P02654 AC090164.2-201ENST00000611487 516 ntBASIC12.37□□□□□ -0.43
APOC1P02654 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.37□□□□□ -0.43
APOC1P02654 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
APOC1P02654 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC1P02654 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
APOC1P02654 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 AC004241.5-201ENST00000623870 2448 ntBASIC12.37□□□□□ -0.43
APOC1P02654 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.37□□□□□ -0.43
APOC1P02654 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.37□□□□□ -0.43
APOC1P02654 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 LINC01815-202ENST00000641468 1409 ntBASIC12.37□□□□□ -0.43
APOC1P02654 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
APOC1P02654 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.36□□□□□ -0.43
APOC1P02654 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
APOC1P02654 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.36□□□□□ -0.43
APOC1P02654 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.36□□□□□ -0.43
APOC1P02654 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.36□□□□□ -0.43
APOC1P02654 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
APOC1P02654 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.36□□□□□ -0.43
APOC1P02654 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.36□□□□□ -0.43
APOC1P02654 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.36□□□□□ -0.43
APOC1P02654 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.36□□□□□ -0.43
APOC1P02654 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.36□□□□□ -0.43
APOC1P02654 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.36□□□□□ -0.43
APOC1P02654 MIR3188-201ENST00000583494 85 ntBASIC12.36□□□□□ -0.43
APOC1P02654 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
APOC1P02654 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
APOC1P02654 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
APOC1P02654 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
APOC1P02654 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
APOC1P02654 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.36□□□□□ -0.43
APOC1P02654 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
APOC1P02654 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOC1P02654 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms