Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 NRADDP-202ENST00000641269 1585 ntBASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC187A0A096LP49 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 SNORA57-201ENST00000383870 149 ntBASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 AC010086.2-201ENST00000428616 226 ntBASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 AL136084.1-201ENST00000449172 318 ntBASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 RPSAP70-201ENST00000504462 864 ntBASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 AC126335.2-201ENST00000623362 4637 ntBASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC187A0A096LP49 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 AC015802.1-201ENST00000588104 1449 ntBASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 AC061965.1-201ENST00000560524 1465 ntBASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 AIG1-203ENST00000367596 559 ntTSL 2 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 CD37-203ENST00000426897 1204 ntTSL 2 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 HIST1H2APS2-201ENST00000454426 370 ntBASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 URB1-AS1-201ENST00000534991 831 ntBASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 KRT8P34-201ENST00000577607 1044 ntBASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC13.05□□□□□ -0.32
CCDC187A0A096LP49 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms