Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.87□□□□□ -0.35
NPIPA1Q9UND3 LINC01815-202ENST00000641468 1409 ntBASIC12.87□□□□□ -0.35
NPIPA1Q9UND3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
NPIPA1Q9UND3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NPIPA1Q9UND3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 PYY2-201ENST00000315776 282 ntBASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 AC097065.1-201ENST00000425737 517 ntBASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 RPL13AP19-201ENST00000434320 584 ntBASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 AC005041.3-201ENST00000606287 649 ntBASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 AC009145.4-201ENST00000625119 1294 ntBASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.86□□□□□ -0.35
NPIPA1Q9UND3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 AC067931.2-201ENST00000623655 2003 ntBASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 AC018638.5-201ENST00000450885 754 ntBASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 SCARNA12-201ENST00000459155 270 ntBASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 NDUFB10P1-201ENST00000567319 521 ntBASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPA1Q9UND3 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms