Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
DUX4Q9UBX2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.35□□□□□ -0.43
DUX4Q9UBX2 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 REXO1L6P-201ENST00000603433 1515 ntBASIC12.34□□□□□ -0.43
DUX4Q9UBX2 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 RN7SL560P-201ENST00000577943 264 ntBASIC12.34□□□□□ -0.43
DUX4Q9UBX2 MIR4783-201ENST00000580343 82 ntBASIC12.34□□□□□ -0.43
DUX4Q9UBX2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 AP000437.1-201ENST00000624057 2085 ntBASIC12.34□□□□□ -0.43
DUX4Q9UBX2 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
DUX4Q9UBX2 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.33□□□□□ -0.43
DUX4Q9UBX2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.33□□□□□ -0.43
DUX4Q9UBX2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
DUX4Q9UBX2 AC015688.4-201ENST00000580780 1647 ntBASIC12.33□□□□□ -0.43
DUX4Q9UBX2 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 MIR326-201ENST00000362220 95 ntBASIC12.33□□□□□ -0.44
DUX4Q9UBX2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 AL355994.2-201ENST00000447882 704 ntBASIC12.33□□□□□ -0.44
DUX4Q9UBX2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 FAM86HP-204ENST00000513466 959 ntBASIC12.33□□□□□ -0.44
DUX4Q9UBX2 RNA5SP412-201ENST00000516234 123 ntBASIC12.33□□□□□ -0.44
DUX4Q9UBX2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 EEF1DP1-201ENST00000585891 896 ntBASIC12.33□□□□□ -0.44
DUX4Q9UBX2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
DUX4Q9UBX2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms