Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
DNMT3BQ9UBC3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DNMT3BQ9UBC3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 AL357373.1-201ENST00000394974 322 ntBASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 PGK1P2-201ENST00000431702 1214 ntBASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 CDCA4P4-201ENST00000435216 680 ntBASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 RNLS-203ENST00000437752 525 ntTSL 2 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 KF455155.1-201ENST00000604493 303 ntBASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 AC010531.8-201ENST00000623341 685 ntBASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DNMT3BQ9UBC3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 MIR3940-201ENST00000579148 102 ntBASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 ENPP7P8-202ENST00000527856 1345 ntBASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 AC020931.1-201ENST00000589622 1346 ntBASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 AL928654.5-201ENST00000624831 2501 ntBASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
DNMT3BQ9UBC3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 AF013593.1-201ENST00000458074 1487 ntBASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
DNMT3BQ9UBC3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms