Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 KRT18P25-201ENST00000508931 1278 ntBASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 BTBD7P1-201ENST00000447253 1453 ntBASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
SMIM3Q9BZL3 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 CTAGE13P-201ENST00000416709 2446 ntBASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 FTLP10-202ENST00000505798 471 ntBASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 TPRX2P-201ENST00000535362 881 ntBASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 AC023310.3-201ENST00000557027 670 ntBASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 AC100756.1-201ENST00000562736 682 ntBASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 AC138749.3-201ENST00000567691 622 ntBASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 AC116165.1-201ENST00000611806 668 ntBASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM3Q9BZL3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms