Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC12.25□□□□□ -0.45
AP3S1Q92572 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.25□□□□□ -0.45
AP3S1Q92572 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.25□□□□□ -0.45
AP3S1Q92572 PGAM5P1-201ENST00000518923 814 ntBASIC12.25□□□□□ -0.45
AP3S1Q92572 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.25□□□□□ -0.45
AP3S1Q92572 AC140878.1-201ENST00000565277 250 ntBASIC12.25□□□□□ -0.45
AP3S1Q92572 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
AP3S1Q92572 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.25□□□□□ -0.45
AP3S1Q92572 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC12.25□□□□□ -0.45
AP3S1Q92572 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.25□□□□□ -0.45
AP3S1Q92572 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
AP3S1Q92572 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
AP3S1Q92572 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
AP3S1Q92572 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.25□□□□□ -0.45
AP3S1Q92572 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.25□□□□□ -0.45
AP3S1Q92572 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
AP3S1Q92572 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S1Q92572 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
AP3S1Q92572 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
AP3S1Q92572 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC12.24□□□□□ -0.45
AP3S1Q92572 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
AP3S1Q92572 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
AP3S1Q92572 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
AP3S1Q92572 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC12.24□□□□□ -0.45
AP3S1Q92572 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC12.24□□□□□ -0.45
AP3S1Q92572 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
AP3S1Q92572 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.24□□□□□ -0.45
AP3S1Q92572 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.24□□□□□ -0.45
AP3S1Q92572 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
AP3S1Q92572 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.24□□□□□ -0.45
AP3S1Q92572 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.24□□□□□ -0.45
AP3S1Q92572 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 AC107890.1-201ENST00000422478 521 ntBASIC12.24□□□□□ -0.45
AP3S1Q92572 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.24□□□□□ -0.45
AP3S1Q92572 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
AP3S1Q92572 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 TPM4P1-201ENST00000436100 807 ntBASIC12.24□□□□□ -0.45
AP3S1Q92572 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.24□□□□□ -0.45
AP3S1Q92572 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.24□□□□□ -0.45
AP3S1Q92572 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.24□□□□□ -0.45
AP3S1Q92572 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.24□□□□□ -0.45
AP3S1Q92572 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.24□□□□□ -0.45
AP3S1Q92572 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12.24□□□□□ -0.45
AP3S1Q92572 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.24□□□□□ -0.45
AP3S1Q92572 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
AP3S1Q92572 AC023310.3-201ENST00000557027 670 ntBASIC12.24□□□□□ -0.45
AP3S1Q92572 AC100756.1-201ENST00000562736 682 ntBASIC12.24□□□□□ -0.45
AP3S1Q92572 AL359711.2-201ENST00000563105 872 ntBASIC12.24□□□□□ -0.45
AP3S1Q92572 AC138749.3-201ENST00000567691 622 ntBASIC12.24□□□□□ -0.45
AP3S1Q92572 AP001063.1-201ENST00000568332 529 ntBASIC12.24□□□□□ -0.45
AP3S1Q92572 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.24□□□□□ -0.45
AP3S1Q92572 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.24□□□□□ -0.45
AP3S1Q92572 AL158211.3-201ENST00000607385 239 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms