Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 TUBB8P8-201ENST00000458717 1058 ntBASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AC021723.1-201ENST00000486306 515 ntBASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 FAM86HP-204ENST00000513466 959 ntBASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AC005962.1-201ENST00000584100 773 ntBASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AP003969.2-201ENST00000623739 2275 ntBASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AC007952.5-201ENST00000572818 1486 ntBASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AC020917.4-201ENST00000623994 1999 ntBASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.76□□□□□ -0.53
RTN4IP1Q8WWV3 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AC010336.1-201ENST00000539278 4739 ntBASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 ST13P19-201ENST00000442505 1124 ntBASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 RPL13AP20-201ENST00000459725 609 ntBASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AL583810.1-201ENST00000553344 1045 ntBASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 AL096828.3-201ENST00000615354 462 ntBASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
RTN4IP1Q8WWV3 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms