Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 GAPDHP65-201ENST00000425487 1006 ntBASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 AC007690.1-201ENST00000451924 468 ntBASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 PEBP1P1-201ENST00000554856 510 ntBASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 AC106782.3-201ENST00000563429 258 ntBASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 DNM1P50-201ENST00000565767 508 ntBASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 AP001120.3-201ENST00000585729 489 ntBASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 U62317.4-201ENST00000609758 448 ntBASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 BIN3-212ENST00000640731 450 ntTSL 5 BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHMP7Q8WUX9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 RPE-208ENST00000436630 1128 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 AC009238.3-201ENST00000512705 217 ntBASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 ASS1P9-201ENST00000513426 1236 ntBASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 SNORD55-201ENST00000581525 80 ntBASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 AC138430.2-201ENST00000624068 504 ntBASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 AC099689.1-201ENST00000624383 1302 ntBASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHMP7Q8WUX9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 MTND6P4-201ENST00000506002 522 ntBASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 NUP210P2-201ENST00000510577 282 ntBASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 AC018868.2-201ENST00000559655 1259 ntBASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 MIR7704-201ENST00000610524 59 ntBASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 AC027601.5-201ENST00000624065 2482 ntBASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHMP7Q8WUX9 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms