Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.24■□□□□ 0.19
IRX3P78415 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.24■□□□□ 0.19
IRX3P78415 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
IRX3P78415 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IRX3P78415 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.23■□□□□ 0.19
IRX3P78415 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 RN7SL832P-201ENST00000607781 1756 ntBASIC16.23■□□□□ 0.19
IRX3P78415 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 AP001972.5-201ENST00000624624 2338 ntBASIC16.23■□□□□ 0.19
IRX3P78415 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
IRX3P78415 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX3P78415 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IRX3P78415 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IRX3P78415 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX3P78415 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.23■□□□□ 0.19
IRX3P78415 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IRX3P78415 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX3P78415 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IRX3P78415 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX3P78415 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.23■□□□□ 0.19
IRX3P78415 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 ABCD1P4-201ENST00000399687 604 ntBASIC16.23■□□□□ 0.19
IRX3P78415 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.23■□□□□ 0.19
IRX3P78415 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.23■□□□□ 0.19
IRX3P78415 HMGA1P1-201ENST00000415560 1062 ntBASIC16.23■□□□□ 0.19
IRX3P78415 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC16.23■□□□□ 0.19
IRX3P78415 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX3P78415 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC16.23■□□□□ 0.19
IRX3P78415 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX3P78415 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
IRX3P78415 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
IRX3P78415 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 AL118506.1-201ENST00000601296 3082 ntBASIC16.23■□□□□ 0.19
IRX3P78415 FTO-214ENST00000636218 2227 ntTSL 5 BASIC16.23■□□□□ 0.19
IRX3P78415 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC16.23■□□□□ 0.19
IRX3P78415 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX3P78415 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX3P78415 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
IRX3P78415 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX3P78415 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX3P78415 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
IRX3P78415 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
IRX3P78415 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
IRX3P78415 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IRX3P78415 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
IRX3P78415 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.22■□□□□ 0.19
IRX3P78415 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 TRIM80P-201ENST00000455685 2848 ntBASIC16.22■□□□□ 0.19
IRX3P78415 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.22■□□□□ 0.19
IRX3P78415 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.22■□□□□ 0.19
IRX3P78415 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.22■□□□□ 0.19
IRX3P78415 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC16.22■□□□□ 0.19
IRX3P78415 AL512599.1-201ENST00000430724 685 ntBASIC16.22■□□□□ 0.19
IRX3P78415 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.22■□□□□ 0.19
IRX3P78415 KRT18P15-201ENST00000458108 1291 ntBASIC16.22■□□□□ 0.19
IRX3P78415 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.22■□□□□ 0.19
IRX3P78415 HNRNPA1P56-201ENST00000505767 954 ntBASIC16.22■□□□□ 0.19
IRX3P78415 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.22■□□□□ 0.19
IRX3P78415 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.22■□□□□ 0.19
IRX3P78415 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.22■□□□□ 0.19
IRX3P78415 AP003392.6-201ENST00000607709 325 ntBASIC16.22■□□□□ 0.19
IRX3P78415 AL139339.2-201ENST00000608063 657 ntBASIC16.22■□□□□ 0.19
IRX3P78415 AL031673.1-201ENST00000611460 466 ntBASIC16.22■□□□□ 0.19
IRX3P78415 AP001527.2-201ENST00000614441 631 ntBASIC16.22■□□□□ 0.19
IRX3P78415 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.22■□□□□ 0.19
IRX3P78415 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
IRX3P78415 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX3P78415 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms