Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.27□□□□□ -0.45
SEC61A1P61619 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.27□□□□□ -0.45
SEC61A1P61619 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.27□□□□□ -0.45
SEC61A1P61619 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.27□□□□□ -0.45
SEC61A1P61619 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 AC004899.1-201ENST00000424687 1714 ntBASIC12.27□□□□□ -0.45
SEC61A1P61619 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.27□□□□□ -0.45
SEC61A1P61619 TUBB8P4-201ENST00000511806 1324 ntBASIC12.27□□□□□ -0.45
SEC61A1P61619 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SEC61A1P61619 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 TNRC18P1-201ENST00000502875 3650 ntBASIC12.27□□□□□ -0.45
SEC61A1P61619 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 AC139712.1-201ENST00000378256 1875 ntBASIC12.27□□□□□ -0.45
SEC61A1P61619 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SEC61A1P61619 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.27□□□□□ -0.45
SEC61A1P61619 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SEC61A1P61619 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SEC61A1P61619 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SEC61A1P61619 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.27□□□□□ -0.45
SEC61A1P61619 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
SEC61A1P61619 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SEC61A1P61619 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
SEC61A1P61619 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 LINC00567-201ENST00000569854 3409 ntBASIC12.26□□□□□ -0.45
SEC61A1P61619 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SEC61A1P61619 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC61A1P61619 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC61A1P61619 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC61A1P61619 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SEC61A1P61619 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC61A1P61619 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SEC61A1P61619 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC61A1P61619 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SEC61A1P61619 AC016700.1-201ENST00000429424 312 ntBASIC12.26□□□□□ -0.45
SEC61A1P61619 CALR4P-201ENST00000431943 946 ntBASIC12.26□□□□□ -0.45
SEC61A1P61619 PUDPP3-201ENST00000445368 636 ntBASIC12.26□□□□□ -0.45
SEC61A1P61619 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.26□□□□□ -0.45
SEC61A1P61619 EIF4HP1-201ENST00000453115 687 ntBASIC12.26□□□□□ -0.45
SEC61A1P61619 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC61A1P61619 AC005740.2-201ENST00000511085 419 ntBASIC12.26□□□□□ -0.45
SEC61A1P61619 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.26□□□□□ -0.45
SEC61A1P61619 AC103988.2-201ENST00000561804 725 ntBASIC12.26□□□□□ -0.45
SEC61A1P61619 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 BNIP3P13-201ENST00000599968 566 ntBASIC12.26□□□□□ -0.45
SEC61A1P61619 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.26□□□□□ -0.45
SEC61A1P61619 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC61A1P61619 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SEC61A1P61619 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC61A1P61619 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC61A1P61619 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SEC61A1P61619 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SEC61A1P61619 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SEC61A1P61619 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC61A1P61619 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC61A1P61619 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC61A1P61619 AC110048.1-201ENST00000604293 2157 ntBASIC12.26□□□□□ -0.45
SEC61A1P61619 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC61A1P61619 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC61A1P61619 AC138028.6-201ENST00000616106 1482 ntBASIC12.26□□□□□ -0.45
SEC61A1P61619 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 AC009474.1-201ENST00000455096 1565 ntBASIC12.26□□□□□ -0.45
SEC61A1P61619 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC61A1P61619 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC61A1P61619 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SEC61A1P61619 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC61A1P61619 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC61A1P61619 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms