Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM23P36406 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM23P36406 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM23P36406 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRIM23P36406 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM23P36406 AC097065.1-201ENST00000425737 517 ntBASIC13.61□□□□□ -0.23
TRIM23P36406 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.61□□□□□ -0.23
TRIM23P36406 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM23P36406 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM23P36406 AC079250.1-201ENST00000456046 531 ntBASIC13.61□□□□□ -0.23
TRIM23P36406 AREG-202ENST00000502307 956 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM23P36406 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.61□□□□□ -0.23
TRIM23P36406 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC13.61□□□□□ -0.23
TRIM23P36406 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.61□□□□□ -0.23
TRIM23P36406 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM23P36406 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM23P36406 AC011471.3-201ENST00000623576 402 ntBASIC13.61□□□□□ -0.23
TRIM23P36406 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM23P36406 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
TRIM23P36406 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
TRIM23P36406 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRIM23P36406 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM23P36406 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM23P36406 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRIM23P36406 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM23P36406 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRIM23P36406 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM23P36406 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM23P36406 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRIM23P36406 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRIM23P36406 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRIM23P36406 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM23P36406 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRIM23P36406 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM23P36406 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
TRIM23P36406 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRIM23P36406 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
TRIM23P36406 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRIM23P36406 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRIM23P36406 AP000354.1-201ENST00000396982 456 ntBASIC13.6□□□□□ -0.23
TRIM23P36406 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM23P36406 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM23P36406 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM23P36406 AC005077.3-201ENST00000449614 213 ntBASIC13.6□□□□□ -0.23
TRIM23P36406 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM23P36406 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM23P36406 RN7SL818P-201ENST00000485099 259 ntBASIC13.6□□□□□ -0.23
TRIM23P36406 KRT18P37-201ENST00000520711 1282 ntBASIC13.6□□□□□ -0.23
TRIM23P36406 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM23P36406 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM23P36406 AC023794.5-201ENST00000564380 2157 ntBASIC13.6□□□□□ -0.23
TRIM23P36406 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM23P36406 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 TRMT112P3-201ENST00000580149 358 ntBASIC13.6□□□□□ -0.23
TRIM23P36406 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 RN7SL725P-201ENST00000606439 259 ntBASIC13.6□□□□□ -0.23
TRIM23P36406 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM23P36406 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM23P36406 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM23P36406 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRIM23P36406 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms