Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 AL162726.2-201ENST00000438986 1017 ntBASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 AC090386.2-201ENST00000623010 1039 ntBASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC11.41□□□□□ -0.58
RCL1Q9Y2P8 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 SSR4P1-201ENST00000415143 412 ntBASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 AC055876.3-201ENST00000431496 288 ntBASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 AL512638.1-201ENST00000457493 794 ntBASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 ECM1P1-201ENST00000604092 1279 ntBASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 AL358472.3-201ENST00000608147 415 ntBASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 AC138649.4-201ENST00000612222 287 ntBASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 AC018445.4-201ENST00000624066 2291 ntBASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RCL1Q9Y2P8 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.59
RCL1Q9Y2P8 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
RCL1Q9Y2P8 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RCL1Q9Y2P8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
RCL1Q9Y2P8 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms