Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 PAX6-249ENST00000639034 1597 ntTSL 5 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 HLA-DOB-206ENST00000438763 1372 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 AP4S1-203ENST00000334725 1122 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 SLC25A6P1-201ENST00000412123 775 ntBASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 AC007557.2-201ENST00000440900 583 ntTSL 2 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 HNRNPA1P62-201ENST00000559372 952 ntBASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 LINC02166-201ENST00000567544 721 ntTSL 3 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 AP002986.1-203ENST00000602310 330 ntTSL 3 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 FAM236A-202ENST00000611003 403 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RIMBP3Q9UFD9 LEMD2-207ENST00000508327 1306 ntTSL 2 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 AC105219.4-201ENST00000529743 1809 ntTSL 3 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 HSPA8P5-201ENST00000456928 2069 ntBASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 RAB30-201ENST00000260056 1393 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 AC111200.1-201ENST00000358778 657 ntBASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 RPL15P3-201ENST00000391491 615 ntBASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 PDHX-202ENST00000430469 952 ntTSL 2 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 AC020899.1-201ENST00000492855 602 ntBASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 AC008588.1-201ENST00000514867 462 ntTSL 3 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 AP000911.1-204ENST00000533091 571 ntTSL 4 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RIMBP3Q9UFD9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 FHL1-229ENST00000629039 1501 ntTSL 2 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 VN1R64P-201ENST00000424940 933 ntBASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 RPE-214ENST00000452025 779 ntTSL 3 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 AP000695.2-202ENST00000454980 649 ntTSL 2 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 SLED1-201ENST00000506741 751 ntBASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 LINC02253-202ENST00000560314 565 ntTSL 5 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 AP002478.2-201ENST00000584060 557 ntTSL 4 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 AL513485.1-201ENST00000617915 845 ntBASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 AC003101.3-201ENST00000624452 768 ntBASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 AC093323.3-201ENST00000632627 949 ntBASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 PABPC1P2-201ENST00000471997 1805 ntBASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 FES-203ENST00000394302 2133 ntTSL 5 BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RIMBP3Q9UFD9 SARNP-201ENST00000336133 926 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 C10orf128-203ENST00000374153 1569 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 HIST1H4C-201ENST00000377803 435 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 CD72-203ENST00000378431 849 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 TRERNA1-201ENST00000431460 462 ntTSL 2 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 AC079988.1-201ENST00000432984 544 ntTSL 4 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 CIDECP-205ENST00000433871 770 ntBASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 AC099796.2-201ENST00000444140 108 ntBASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 AC004217.1-201ENST00000469026 794 ntBASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 ATP6V0CP1-201ENST00000482495 618 ntBASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 RN7SL454P-201ENST00000492744 243 ntBASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 AC091849.2-201ENST00000503113 692 ntTSL 3 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 AC008434.1-201ENST00000514201 549 ntTSL 3 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 ATP5G1-209ENST00000514808 359 ntTSL 2 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 GMDS-AS1-213ENST00000534441 738 ntTSL 3 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 ZCRB1-205ENST00000552673 907 ntTSL 3 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms