Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CUEDC1Q9NWM3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 AP000437.1-201ENST00000624057 2085 ntBASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CUEDC1Q9NWM3 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 RPL7P35-201ENST00000446943 740 ntBASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 AC005357.2-202ENST00000590507 1060 ntBASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 CR392039.2-201ENST00000623182 509 ntBASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 KRT8P18-201ENST00000413425 1445 ntBASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 AC093462.1-201ENST00000621167 1683 ntBASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.52□□□□□ -0.25
CUEDC1Q9NWM3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 AL512274.1-201ENST00000562471 2027 ntBASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CUEDC1Q9NWM3 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms