Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 FAM58BP-201ENST00000439056 645 ntBASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AC002472.2-201ENST00000442739 958 ntBASIC17.12■□□□□ 0.33
UPF2Q9HAU5 HIST2H2BB-201ENST00000449108 381 ntBASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 PGAM1P5-201ENST00000548011 764 ntBASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AC003686.1-201ENST00000550956 1034 ntBASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AC190387.1-201ENST00000551683 408 ntBASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AC133540.1-201ENST00000620845 1019 ntBASIC17.12■□□□□ 0.33
UPF2Q9HAU5 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 AC008040.5-201ENST00000599781 1781 ntBASIC17.11■□□□□ 0.33
UPF2Q9HAU5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 MIR1202-201ENST00000408529 83 ntBASIC17.11■□□□□ 0.33
UPF2Q9HAU5 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.11■□□□□ 0.33
UPF2Q9HAU5 CNN2P8-201ENST00000421872 913 ntBASIC17.11■□□□□ 0.33
UPF2Q9HAU5 AC012441.2-201ENST00000444843 739 ntBASIC17.11■□□□□ 0.33
UPF2Q9HAU5 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 AC007389.4-201ENST00000454674 793 ntBASIC17.11■□□□□ 0.33
UPF2Q9HAU5 FTH1P14-201ENST00000482930 551 ntBASIC17.11■□□□□ 0.33
UPF2Q9HAU5 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 SLC25A47P1-201ENST00000531577 414 ntBASIC17.11■□□□□ 0.33
UPF2Q9HAU5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 AHCYP4-201ENST00000419201 1315 ntBASIC17.11■□□□□ 0.33
UPF2Q9HAU5 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPF2Q9HAU5 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF2Q9HAU5 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
UPF2Q9HAU5 AC093462.1-201ENST00000621167 1683 ntBASIC17.1■□□□□ 0.33
UPF2Q9HAU5 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF2Q9HAU5 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPF2Q9HAU5 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPF2Q9HAU5 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms