Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 MTND4P11-201ENST00000417020 1058 ntBASIC12.73□□□□□ -0.37
USB1Q9BQ65 SETP10-201ENST00000424368 814 ntBASIC12.73□□□□□ -0.37
USB1Q9BQ65 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 AP000949.1-201ENST00000438328 629 ntBASIC12.73□□□□□ -0.37
USB1Q9BQ65 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 AC090568.1-201ENST00000509499 856 ntBASIC12.73□□□□□ -0.37
USB1Q9BQ65 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 AC005586.2-201ENST00000563946 837 ntBASIC12.73□□□□□ -0.37
USB1Q9BQ65 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 AC091614.1-201ENST00000606898 879 ntTSL 3 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 AC015688.4-201ENST00000580780 1647 ntBASIC12.73□□□□□ -0.37
USB1Q9BQ65 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 AP001267.2-201ENST00000532619 2086 ntBASIC12.73□□□□□ -0.37
USB1Q9BQ65 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
USB1Q9BQ65 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USB1Q9BQ65 PCDHB17P-202ENST00000623466 3066 ntBASIC12.73□□□□□ -0.37
USB1Q9BQ65 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 AC113367.3-201ENST00000508316 1912 ntBASIC12.72□□□□□ -0.37
USB1Q9BQ65 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 MTND6P32-201ENST00000457611 483 ntBASIC12.72□□□□□ -0.37
USB1Q9BQ65 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 AC003686.1-201ENST00000550956 1034 ntBASIC12.72□□□□□ -0.37
USB1Q9BQ65 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 AC012181.2-201ENST00000570210 699 ntBASIC12.72□□□□□ -0.37
USB1Q9BQ65 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 AC021016.3-201ENST00000608367 477 ntBASIC12.72□□□□□ -0.37
USB1Q9BQ65 AL353770.1-201ENST00000614915 403 ntBASIC12.72□□□□□ -0.37
USB1Q9BQ65 AL353726.2-201ENST00000623259 884 ntBASIC12.72□□□□□ -0.37
USB1Q9BQ65 AC015967.2-201ENST00000624092 234 ntBASIC12.72□□□□□ -0.37
USB1Q9BQ65 AL118508.4-201ENST00000624142 1176 ntBASIC12.72□□□□□ -0.37
USB1Q9BQ65 AC006435.4-201ENST00000625037 234 ntBASIC12.72□□□□□ -0.37
USB1Q9BQ65 AL356737.1-201ENST00000634391 234 ntBASIC12.72□□□□□ -0.37
USB1Q9BQ65 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USB1Q9BQ65 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.72□□□□□ -0.37
USB1Q9BQ65 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms