Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MIR378I-201ENST00000582688 76 ntBASIC11.07□□□□□ -0.64
VPS13CQ709C8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 AC007279.1-201ENST00000448547 837 ntBASIC11.07□□□□□ -0.64
VPS13CQ709C8 AC114781.1-201ENST00000450559 1028 ntBASIC11.07□□□□□ -0.64
VPS13CQ709C8 METTL23-211ENST00000589977 617 ntTSL 3 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 AC012358.2-201ENST00000430010 1434 ntBASIC11.07□□□□□ -0.64
VPS13CQ709C8 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
VPS13CQ709C8 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
VPS13CQ709C8 RCC2P1-201ENST00000452257 1476 ntBASIC11.07□□□□□ -0.64
VPS13CQ709C8 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 AC074019.1-201ENST00000428788 1096 ntBASIC11.06□□□□□ -0.64
VPS13CQ709C8 AC010997.1-201ENST00000447646 350 ntBASIC11.06□□□□□ -0.64
VPS13CQ709C8 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 RN7SL750P-201ENST00000582814 238 ntBASIC11.06□□□□□ -0.64
VPS13CQ709C8 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 AL117379.1-201ENST00000619319 677 ntBASIC11.06□□□□□ -0.64
VPS13CQ709C8 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 CR383656.2-201ENST00000548656 2254 ntBASIC11.06□□□□□ -0.64
VPS13CQ709C8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 FAM90A27P-201ENST00000593323 1370 ntBASIC11.06□□□□□ -0.64
VPS13CQ709C8 FAM90A28P-202ENST00000597191 1374 ntBASIC11.06□□□□□ -0.64
VPS13CQ709C8 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 AC016304.1-201ENST00000476363 413 ntBASIC11.06□□□□□ -0.64
VPS13CQ709C8 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 MIR3940-201ENST00000579148 102 ntBASIC11.06□□□□□ -0.64
VPS13CQ709C8 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 AC061965.1-201ENST00000560524 1465 ntBASIC11.06□□□□□ -0.64
VPS13CQ709C8 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 AC002511.3-201ENST00000638098 420 ntBASIC11.06□□□□□ -0.64
VPS13CQ709C8 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 AL118506.1-201ENST00000601296 3082 ntBASIC11.06□□□□□ -0.64
VPS13CQ709C8 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 USP8-219ENST00000625664 1568 ntTSL 5 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.06□□□□□ -0.64
VPS13CQ709C8 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
VPS13CQ709C8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 TMEM256P1-201ENST00000430550 340 ntBASIC11.05□□□□□ -0.64
VPS13CQ709C8 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 AC067942.2-201ENST00000506227 1268 ntBASIC11.05□□□□□ -0.64
VPS13CQ709C8 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 IGHV3OR16-11-201ENST00000565524 349 ntBASIC11.05□□□□□ -0.64
VPS13CQ709C8 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 TFAM-201ENST00000373895 973 ntTSL 2 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 RNA5SP407-201ENST00000410275 110 ntBASIC11.05□□□□□ -0.64
VPS13CQ709C8 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 AP000343.1-201ENST00000440602 385 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms