Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 SIRPB3P-201ENST00000340424 1216 ntBASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 RPL3P5-201ENST00000441645 1232 ntBASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 FAM187B2P-201ENST00000577135 713 ntBASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 CR392039.2-201ENST00000623182 509 ntBASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 AL009178.2-201ENST00000597278 2719 ntBASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 ZNF436-AS1-201ENST00000335648 2547 ntBASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 DDC-212ENST00000615193 1674 ntTSL 3 BASIC15.99■□□□□ 0.15
SHROOM1Q2M3G4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 ERG-211ENST00000453032 1595 ntTSL 2 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 AC112250.1-201ENST00000504640 745 ntBASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 SAA2-206ENST00000530400 323 ntTSL 3 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHROOM1Q2M3G4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 CR383656.2-201ENST00000548656 2254 ntBASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 MANEA-AS1-201ENST00000564541 2268 ntBASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 RPS18P9-201ENST00000482817 460 ntBASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 RN7SL605P-201ENST00000577229 281 ntBASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms