Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 RN7SL582P-201ENST00000491078 279 ntBASIC18.69■□□□□ 0.58
CGNL1Q0VF96 BAK1P2-201ENST00000532665 631 ntBASIC18.69■□□□□ 0.58
CGNL1Q0VF96 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC18.69■□□□□ 0.58
CGNL1Q0VF96 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CGNL1Q0VF96 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 AL513497.1-201ENST00000624273 2083 ntBASIC18.68■□□□□ 0.58
CGNL1Q0VF96 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 ABCD1P2-201ENST00000429313 1601 ntBASIC18.68■□□□□ 0.58
CGNL1Q0VF96 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 STK3-218ENST00000617590 2485 ntTSL 5 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 RPL10-203ENST00000406022 748 ntTSL 3 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 KRT18P4-201ENST00000422599 1288 ntBASIC18.68■□□□□ 0.58
CGNL1Q0VF96 RN7SL351P-201ENST00000469306 248 ntBASIC18.68■□□□□ 0.58
CGNL1Q0VF96 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 AL359219.1-201ENST00000556311 934 ntBASIC18.68■□□□□ 0.58
CGNL1Q0VF96 AL118516.1-201ENST00000564152 670 ntBASIC18.68■□□□□ 0.58
CGNL1Q0VF96 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 AC126755.5-201ENST00000622756 267 ntBASIC18.68■□□□□ 0.58
CGNL1Q0VF96 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGNL1Q0VF96 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 GUCY2EP-203ENST00000531117 1918 ntBASIC18.67■□□□□ 0.58
CGNL1Q0VF96 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 CROT-203ENST00000419147 2959 ntTSL 2 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 BPIFB5P-201ENST00000457066 1099 ntBASIC18.67■□□□□ 0.58
CGNL1Q0VF96 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 AC012158.2-201ENST00000536546 354 ntBASIC18.67■□□□□ 0.58
CGNL1Q0VF96 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 AP005264.6-204ENST00000588436 719 ntBASIC18.67■□□□□ 0.58
CGNL1Q0VF96 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC18.67■□□□□ 0.58
CGNL1Q0VF96 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 KRT8P42-201ENST00000405771 1399 ntBASIC18.67■□□□□ 0.58
CGNL1Q0VF96 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGNL1Q0VF96 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGNL1Q0VF96 COX20P1-201ENST00000366529 357 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms