Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.14□□□□□ -0.31
RAE1P78406 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.14□□□□□ -0.31
RAE1P78406 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 GGTLC4P-201ENST00000402176 664 ntBASIC13.14□□□□□ -0.31
RAE1P78406 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.14□□□□□ -0.31
RAE1P78406 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.14□□□□□ -0.31
RAE1P78406 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.14□□□□□ -0.31
RAE1P78406 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.14□□□□□ -0.31
RAE1P78406 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.14□□□□□ -0.31
RAE1P78406 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.14□□□□□ -0.31
RAE1P78406 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.14□□□□□ -0.31
RAE1P78406 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.14□□□□□ -0.31
RAE1P78406 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 AC145285.5-201ENST00000562217 361 ntBASIC13.14□□□□□ -0.31
RAE1P78406 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
RAE1P78406 AC020922.3-201ENST00000595064 547 ntBASIC13.14□□□□□ -0.31
RAE1P78406 AF254983.2-201ENST00000612331 135 ntBASIC13.14□□□□□ -0.31
RAE1P78406 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RAE1P78406 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 GDA-203ENST00000376986 1771 ntTSL 2 BASIC13.14□□□□□ -0.31
RAE1P78406 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RAE1P78406 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.14□□□□□ -0.31
RAE1P78406 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RAE1P78406 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAE1P78406 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.14□□□□□ -0.31
RAE1P78406 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.14□□□□□ -0.31
RAE1P78406 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RAE1P78406 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.14□□□□□ -0.31
RAE1P78406 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.13□□□□□ -0.31
RAE1P78406 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 PCDHB19P-202ENST00000625133 2914 ntBASIC13.13□□□□□ -0.31
RAE1P78406 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RAE1P78406 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC13.13□□□□□ -0.31
RAE1P78406 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 AC020907.1-201ENST00000616460 1350 ntBASIC13.13□□□□□ -0.31
RAE1P78406 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RAE1P78406 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 MIR769-201ENST00000390225 118 ntBASIC13.13□□□□□ -0.31
RAE1P78406 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 AC007274.1-201ENST00000439805 662 ntBASIC13.13□□□□□ -0.31
RAE1P78406 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.13□□□□□ -0.31
RAE1P78406 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.13□□□□□ -0.31
RAE1P78406 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.13□□□□□ -0.31
RAE1P78406 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 ACTG1P17-201ENST00000558391 1119 ntBASIC13.13□□□□□ -0.31
RAE1P78406 MIR3677-201ENST00000578964 60 ntBASIC13.13□□□□□ -0.31
RAE1P78406 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 AC009560.1-201ENST00000620208 434 ntBASIC13.13□□□□□ -0.31
RAE1P78406 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.13□□□□□ -0.31
RAE1P78406 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RAE1P78406 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.13□□□□□ -0.31
RAE1P78406 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RAE1P78406 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RAE1P78406 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.13□□□□□ -0.31
RAE1P78406 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RAE1P78406 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RAE1P78406 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAE1P78406 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.13□□□□□ -0.31
RAE1P78406 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms