Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 AC244394.1-201ENST00000435000 1665 ntBASIC12.29□□□□□ -0.44
SEC61A1P61619 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SEC61A1P61619 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
SEC61A1P61619 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.28□□□□□ -0.44
SEC61A1P61619 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.28□□□□□ -0.44
SEC61A1P61619 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.28□□□□□ -0.44
SEC61A1P61619 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.28□□□□□ -0.44
SEC61A1P61619 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.28□□□□□ -0.44
SEC61A1P61619 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.28□□□□□ -0.44
SEC61A1P61619 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.28□□□□□ -0.44
SEC61A1P61619 AL139099.5-201ENST00000635274 300 ntBASIC12.28□□□□□ -0.44
SEC61A1P61619 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SEC61A1P61619 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SEC61A1P61619 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.27□□□□□ -0.44
SEC61A1P61619 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC61A1P61619 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC61A1P61619 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC61A1P61619 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
SEC61A1P61619 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.27□□□□□ -0.44
SEC61A1P61619 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SEC61A1P61619 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC61A1P61619 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
SEC61A1P61619 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.27□□□□□ -0.44
SEC61A1P61619 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.27□□□□□ -0.44
SEC61A1P61619 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SEC61A1P61619 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC61A1P61619 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SEC61A1P61619 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SEC61A1P61619 PCDHA6-201ENST00000378126 3267 ntBASIC12.27□□□□□ -0.45
SEC61A1P61619 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
SEC61A1P61619 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 AL355102.3-201ENST00000554299 1678 ntBASIC12.27□□□□□ -0.45
SEC61A1P61619 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
SEC61A1P61619 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.27□□□□□ -0.45
SEC61A1P61619 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SEC61A1P61619 CICP12-201ENST00000455801 843 ntBASIC12.27□□□□□ -0.45
SEC61A1P61619 AKR7A2P1-201ENST00000460134 915 ntBASIC12.27□□□□□ -0.45
SEC61A1P61619 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.27□□□□□ -0.45
SEC61A1P61619 SCARNA20.5-201ENST00000516991 142 ntBASIC12.27□□□□□ -0.45
SEC61A1P61619 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.27□□□□□ -0.45
SEC61A1P61619 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.27□□□□□ -0.45
SEC61A1P61619 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.27□□□□□ -0.45
SEC61A1P61619 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.27□□□□□ -0.45
SEC61A1P61619 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.27□□□□□ -0.45
SEC61A1P61619 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms