Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
ZC3H6P61129 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
ZC3H6P61129 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.2■□□□□ 0.5
ZC3H6P61129 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.2■□□□□ 0.5
ZC3H6P61129 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC18.2■□□□□ 0.5
ZC3H6P61129 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ZC3H6P61129 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
ZC3H6P61129 AC015813.5-201ENST00000624641 1514 ntBASIC18.2■□□□□ 0.5
ZC3H6P61129 BX640514.1-201ENST00000583223 1918 ntBASIC18.2■□□□□ 0.5
ZC3H6P61129 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.2■□□□□ 0.5
ZC3H6P61129 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ZC3H6P61129 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
ZC3H6P61129 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 SERF2-204ENST00000402131 586 ntTSL 2 BASIC18.2■□□□□ 0.5
ZC3H6P61129 IQCF4-203ENST00000428561 420 ntBASIC18.2■□□□□ 0.5
ZC3H6P61129 RPL18AP15-201ENST00000430258 517 ntBASIC18.2■□□□□ 0.5
ZC3H6P61129 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
ZC3H6P61129 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC18.2■□□□□ 0.5
ZC3H6P61129 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ZC3H6P61129 AC022447.5-201ENST00000504817 392 ntBASIC18.2■□□□□ 0.5
ZC3H6P61129 OR52V1P-201ENST00000515557 898 ntBASIC18.2■□□□□ 0.5
ZC3H6P61129 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC18.2■□□□□ 0.5
ZC3H6P61129 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC18.2■□□□□ 0.5
ZC3H6P61129 ABCD1P3-201ENST00000562927 605 ntBASIC18.2■□□□□ 0.5
ZC3H6P61129 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC18.2■□□□□ 0.5
ZC3H6P61129 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC18.2■□□□□ 0.5
ZC3H6P61129 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC18.2■□□□□ 0.5
ZC3H6P61129 MDC1-209ENST00000613547 830 ntTSL 5 BASIC18.2■□□□□ 0.5
ZC3H6P61129 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.2■□□□□ 0.5
ZC3H6P61129 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ZC3H6P61129 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ZC3H6P61129 AC008038.1-201ENST00000634247 1314 ntBASIC18.2■□□□□ 0.5
ZC3H6P61129 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ZC3H6P61129 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H6P61129 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.19■□□□□ 0.5
ZC3H6P61129 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC18.19■□□□□ 0.5
ZC3H6P61129 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC18.19■□□□□ 0.5
ZC3H6P61129 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.19■□□□□ 0.5
ZC3H6P61129 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ZC3H6P61129 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ZC3H6P61129 KRT8P6-201ENST00000399259 1207 ntBASIC18.19■□□□□ 0.5
ZC3H6P61129 RBMXP1-201ENST00000408004 1191 ntBASIC18.19■□□□□ 0.5
ZC3H6P61129 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC18.19■□□□□ 0.5
ZC3H6P61129 YBX1P3-201ENST00000468366 909 ntBASIC18.19■□□□□ 0.5
ZC3H6P61129 AC090820.1-201ENST00000519722 591 ntBASIC18.19■□□□□ 0.5
ZC3H6P61129 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC18.19■□□□□ 0.5
ZC3H6P61129 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC18.19■□□□□ 0.5
ZC3H6P61129 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC18.19■□□□□ 0.5
ZC3H6P61129 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC18.19■□□□□ 0.5
ZC3H6P61129 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC18.19■□□□□ 0.5
ZC3H6P61129 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC18.19■□□□□ 0.5
ZC3H6P61129 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC18.19■□□□□ 0.5
ZC3H6P61129 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.19■□□□□ 0.5
ZC3H6P61129 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.19■□□□□ 0.5
ZC3H6P61129 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H6P61129 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H6P61129 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H6P61129 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.18■□□□□ 0.5
ZC3H6P61129 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H6P61129 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
ZC3H6P61129 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ZC3H6P61129 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
ZC3H6P61129 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H6P61129 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H6P61129 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H6P61129 AL157996.1-201ENST00000624684 2299 ntBASIC18.18■□□□□ 0.5
ZC3H6P61129 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H6P61129 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.18■□□□□ 0.5
ZC3H6P61129 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC18.18■□□□□ 0.5
ZC3H6P61129 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms