Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S2P59780 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.97□□□□□ -0.49
AP3S2P59780 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 TPM4P1-201ENST00000436100 807 ntBASIC11.97□□□□□ -0.49
AP3S2P59780 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC11.97□□□□□ -0.49
AP3S2P59780 CICP12-201ENST00000455801 843 ntBASIC11.97□□□□□ -0.49
AP3S2P59780 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S2P59780 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S2P59780 AL391280.1-201ENST00000506969 1062 ntBASIC11.97□□□□□ -0.49
AP3S2P59780 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S2P59780 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.97□□□□□ -0.49
AP3S2P59780 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.97□□□□□ -0.49
AP3S2P59780 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S2P59780 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC11.97□□□□□ -0.49
AP3S2P59780 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.97□□□□□ -0.49
AP3S2P59780 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 AC009093.2-202ENST00000620513 2079 ntBASIC11.97□□□□□ -0.49
AP3S2P59780 GUCY2EP-203ENST00000531117 1918 ntBASIC11.97□□□□□ -0.49
AP3S2P59780 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC11.97□□□□□ -0.49
AP3S2P59780 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 REXO1L6P-201ENST00000603433 1515 ntBASIC11.96□□□□□ -0.49
AP3S2P59780 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC11.96□□□□□ -0.49
AP3S2P59780 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.96□□□□□ -0.49
AP3S2P59780 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.96□□□□□ -0.49
AP3S2P59780 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.96□□□□□ -0.49
AP3S2P59780 AC100757.3-201ENST00000622361 1406 ntBASIC11.96□□□□□ -0.49
AP3S2P59780 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
AP3S2P59780 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC11.96□□□□□ -0.49
AP3S2P59780 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
AP3S2P59780 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
AP3S2P59780 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.96□□□□□ -0.49
AP3S2P59780 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC11.96□□□□□ -0.49
AP3S2P59780 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
AP3S2P59780 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.96□□□□□ -0.49
AP3S2P59780 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.96□□□□□ -0.49
AP3S2P59780 AC140878.1-201ENST00000565277 250 ntBASIC11.96□□□□□ -0.49
AP3S2P59780 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.96□□□□□ -0.49
AP3S2P59780 AC008761.3-201ENST00000624803 892 ntBASIC11.96□□□□□ -0.49
AP3S2P59780 PES1-205ENST00000405677 2708 ntTSL 2 BASIC11.96□□□□□ -0.49
AP3S2P59780 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
AP3S2P59780 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.96□□□□□ -0.5
AP3S2P59780 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
AP3S2P59780 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC11.96□□□□□ -0.5
AP3S2P59780 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
AP3S2P59780 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
AP3S2P59780 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.96□□□□□ -0.5
AP3S2P59780 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
AP3S2P59780 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
AP3S2P59780 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
AP3S2P59780 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC11.96□□□□□ -0.5
AP3S2P59780 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
AP3S2P59780 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC11.95□□□□□ -0.5
AP3S2P59780 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
AP3S2P59780 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC11.95□□□□□ -0.5
AP3S2P59780 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
AP3S2P59780 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms