Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ATRXP46100 AC007686.3-201ENST00000619017 3487 ntBASIC12.52□□□□□ -0.41
ATRXP46100 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 VTI1BP2-201ENST00000394154 696 ntBASIC12.52□□□□□ -0.41
ATRXP46100 AC010086.2-201ENST00000428616 226 ntBASIC12.52□□□□□ -0.41
ATRXP46100 IGHV3-60-201ENST00000521678 354 ntBASIC12.52□□□□□ -0.41
ATRXP46100 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.52□□□□□ -0.41
ATRXP46100 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC12.52□□□□□ -0.41
ATRXP46100 AL512310.5-201ENST00000551999 515 ntBASIC12.52□□□□□ -0.41
ATRXP46100 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC12.52□□□□□ -0.41
ATRXP46100 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC12.52□□□□□ -0.41
ATRXP46100 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.52□□□□□ -0.41
ATRXP46100 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.52□□□□□ -0.41
ATRXP46100 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.52□□□□□ -0.41
ATRXP46100 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 AL513477.1-201ENST00000602865 2407 ntBASIC12.52□□□□□ -0.41
ATRXP46100 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
ATRXP46100 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ATRXP46100 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
ATRXP46100 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
ATRXP46100 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.51□□□□□ -0.41
ATRXP46100 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.51□□□□□ -0.41
ATRXP46100 RAB13-201ENST00000368575 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 LINC00424-201ENST00000413124 654 ntTSL 4 BASIC12.51□□□□□ -0.41
ATRXP46100 AC087163.1-201ENST00000430089 381 ntBASIC12.51□□□□□ -0.41
ATRXP46100 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC12.51□□□□□ -0.41
ATRXP46100 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC12.51□□□□□ -0.41
ATRXP46100 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ATRXP46100 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.51□□□□□ -0.41
ATRXP46100 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
ATRXP46100 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.51□□□□□ -0.41
ATRXP46100 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.51□□□□□ -0.41
ATRXP46100 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.51□□□□□ -0.41
ATRXP46100 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
ATRXP46100 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.51□□□□□ -0.41
ATRXP46100 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 ARL4A-202ENST00000396662 1296 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ATRXP46100 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC12.51□□□□□ -0.41
ATRXP46100 RPSAP16-201ENST00000447583 821 ntBASIC12.51□□□□□ -0.41
ATRXP46100 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
ATRXP46100 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC12.51□□□□□ -0.41
ATRXP46100 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC12.51□□□□□ -0.41
ATRXP46100 AC136475.7-201ENST00000602949 592 ntBASIC12.51□□□□□ -0.41
ATRXP46100 MIR7847-201ENST00000610912 103 ntBASIC12.51□□□□□ -0.41
ATRXP46100 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.51□□□□□ -0.41
ATRXP46100 AL807752.1-201ENST00000395082 1322 ntBASIC12.51□□□□□ -0.41
ATRXP46100 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
ATRXP46100 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ATRXP46100 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
ATRXP46100 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC12.5□□□□□ -0.41
ATRXP46100 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ATRXP46100 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATRXP46100 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.5□□□□□ -0.41
ATRXP46100 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ATRXP46100 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATRXP46100 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.5□□□□□ -0.41
ATRXP46100 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.5□□□□□ -0.41
ATRXP46100 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATRXP46100 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
ATRXP46100 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ATRXP46100 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ATRXP46100 NAA10-205ENST00000393712 908 ntTSL 5 BASIC12.5□□□□□ -0.41
ATRXP46100 MIR1307-201ENST00000408840 149 ntBASIC12.5□□□□□ -0.41
ATRXP46100 AL121994.1-201ENST00000413189 402 ntBASIC12.5□□□□□ -0.41
ATRXP46100 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC12.5□□□□□ -0.41
ATRXP46100 AC096713.1-201ENST00000514650 978 ntBASIC12.5□□□□□ -0.41
ATRXP46100 AC116036.2-201ENST00000607592 462 ntBASIC12.5□□□□□ -0.41
ATRXP46100 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC12.5□□□□□ -0.41
ATRXP46100 AC137723.2-201ENST00000623540 398 ntBASIC12.5□□□□□ -0.41
ATRXP46100 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATRXP46100 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ATRXP46100 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATRXP46100 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ATRXP46100 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ATRXP46100 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ATRXP46100 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms