Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CLCN1P35523 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC15.87■□□□□ 0.13
CLCN1P35523 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC15.87■□□□□ 0.13
CLCN1P35523 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCN1P35523 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCN1P35523 PPP2R1A-205ENST00000462990 2730 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCN1P35523 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
CLCN1P35523 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CLCN1P35523 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 RN7SKP175-201ENST00000408472 289 ntBASIC15.87■□□□□ 0.13
CLCN1P35523 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.87■□□□□ 0.13
CLCN1P35523 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.87■□□□□ 0.13
CLCN1P35523 AL590640.2-201ENST00000457038 527 ntBASIC15.87■□□□□ 0.13
CLCN1P35523 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLCN1P35523 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.87■□□□□ 0.13
CLCN1P35523 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.87■□□□□ 0.13
CLCN1P35523 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.87■□□□□ 0.13
CLCN1P35523 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLCN1P35523 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC15.87■□□□□ 0.13
CLCN1P35523 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CLCN1P35523 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCN1P35523 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCN1P35523 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC15.87■□□□□ 0.13
CLCN1P35523 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCN1P35523 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC15.87■□□□□ 0.13
CLCN1P35523 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CLCN1P35523 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC15.87■□□□□ 0.13
CLCN1P35523 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CLCN1P35523 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC15.87■□□□□ 0.13
CLCN1P35523 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC15.87■□□□□ 0.13
CLCN1P35523 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLCN1P35523 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN1P35523 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC15.86■□□□□ 0.13
CLCN1P35523 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLCN1P35523 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLCN1P35523 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN1P35523 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN1P35523 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN1P35523 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CLCN1P35523 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.86■□□□□ 0.13
CLCN1P35523 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN1P35523 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.86■□□□□ 0.13
CLCN1P35523 RNA5SP486-201ENST00000515961 83 ntBASIC15.86■□□□□ 0.13
CLCN1P35523 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN1P35523 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.86■□□□□ 0.13
CLCN1P35523 AC103988.2-201ENST00000561804 725 ntBASIC15.86■□□□□ 0.13
CLCN1P35523 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CLCN1P35523 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN1P35523 AL022328.1-201ENST00000610050 478 ntBASIC15.86■□□□□ 0.13
CLCN1P35523 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.86■□□□□ 0.13
CLCN1P35523 AL358472.5-202ENST00000641448 1267 ntBASIC15.86■□□□□ 0.13
CLCN1P35523 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CLCN1P35523 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CLCN1P35523 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC15.86■□□□□ 0.13
CLCN1P35523 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
CLCN1P35523 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 AC009108.4-201ENST00000623284 2451 ntBASIC15.86■□□□□ 0.13
CLCN1P35523 AC006037.2-201ENST00000622975 2232 ntBASIC15.86■□□□□ 0.13
CLCN1P35523 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLCN1P35523 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLCN1P35523 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLCN1P35523 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLCN1P35523 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms