Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CHRNA3P32297 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA3P32297 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.71□□□□□ -0.06
CHRNA3P32297 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.71□□□□□ -0.06
CHRNA3P32297 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNA3P32297 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNA3P32297 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
CHRNA3P32297 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNA3P32297 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNA3P32297 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CHRNA3P32297 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNA3P32297 GHET1-201ENST00000627071 1906 ntBASIC14.7□□□□□ -0.06
CHRNA3P32297 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
CHRNA3P32297 AHCYP4-201ENST00000419201 1315 ntBASIC14.7□□□□□ -0.06
CHRNA3P32297 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CHRNA3P32297 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CHRNA3P32297 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CHRNA3P32297 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CHRNA3P32297 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
CHRNA3P32297 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.7□□□□□ -0.06
CHRNA3P32297 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CHRNA3P32297 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.7□□□□□ -0.06
CHRNA3P32297 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNA3P32297 ISCA2P1-201ENST00000425548 448 ntBASIC14.7□□□□□ -0.06
CHRNA3P32297 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNA3P32297 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.7□□□□□ -0.06
CHRNA3P32297 AC006335.1-201ENST00000445200 547 ntBASIC14.7□□□□□ -0.06
CHRNA3P32297 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.7□□□□□ -0.06
CHRNA3P32297 AC003686.1-201ENST00000550956 1034 ntBASIC14.7□□□□□ -0.06
CHRNA3P32297 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.7□□□□□ -0.06
CHRNA3P32297 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 AC002350.2-201ENST00000623894 1828 ntBASIC14.7□□□□□ -0.06
CHRNA3P32297 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CHRNA3P32297 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.7□□□□□ -0.06
CHRNA3P32297 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNA3P32297 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 LINC00567-201ENST00000569854 3409 ntBASIC14.7□□□□□ -0.06
CHRNA3P32297 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNA3P32297 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.7□□□□□ -0.06
CHRNA3P32297 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CHRNA3P32297 AC060814.4-201ENST00000594169 2163 ntBASIC14.7□□□□□ -0.06
CHRNA3P32297 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CHRNA3P32297 AL031719.1-201ENST00000623365 2587 ntBASIC14.7□□□□□ -0.06
CHRNA3P32297 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA3P32297 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CHRNA3P32297 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHRNA3P32297 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHRNA3P32297 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHRNA3P32297 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
CHRNA3P32297 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.69□□□□□ -0.06
CHRNA3P32297 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRNA3P32297 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.69□□□□□ -0.06
CHRNA3P32297 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHRNA3P32297 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRNA3P32297 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRNA3P32297 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.69□□□□□ -0.06
CHRNA3P32297 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRNA3P32297 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.69□□□□□ -0.06
CHRNA3P32297 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.69□□□□□ -0.06
CHRNA3P32297 UPF3AP2-201ENST00000457924 1132 ntBASIC14.69□□□□□ -0.06
CHRNA3P32297 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.69□□□□□ -0.06
CHRNA3P32297 NUP210P1-202ENST00000504322 710 ntBASIC14.69□□□□□ -0.06
CHRNA3P32297 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CHRNA3P32297 RN7SL574P-201ENST00000581512 297 ntBASIC14.69□□□□□ -0.06
CHRNA3P32297 AC106872.11-201ENST00000605838 421 ntBASIC14.69□□□□□ -0.06
CHRNA3P32297 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.69□□□□□ -0.06
CHRNA3P32297 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 FMO6P-201ENST00000236166 1620 ntBASIC14.69□□□□□ -0.06
CHRNA3P32297 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNA3P32297 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms