Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 LRRC59-203ENST00000576448 1531 ntBASIC10.79□□□□□ -0.68
CXCL1P09341 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL1P09341 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL1P09341 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL1P09341 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL1P09341 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
CXCL1P09341 OACYLP-201ENST00000417918 2208 ntBASIC10.79□□□□□ -0.68
CXCL1P09341 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC10.79□□□□□ -0.68
CXCL1P09341 AC134915.1-201ENST00000426461 574 ntBASIC10.79□□□□□ -0.68
CXCL1P09341 AL161932.2-201ENST00000435436 679 ntBASIC10.79□□□□□ -0.68
CXCL1P09341 GNAQP1-201ENST00000444815 1067 ntBASIC10.79□□□□□ -0.68
CXCL1P09341 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC10.79□□□□□ -0.68
CXCL1P09341 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL1P09341 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC10.79□□□□□ -0.68
CXCL1P09341 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL1P09341 AC027237.1-201ENST00000560942 655 ntBASIC10.79□□□□□ -0.68
CXCL1P09341 AC025678.2-201ENST00000562061 970 ntBASIC10.79□□□□□ -0.68
CXCL1P09341 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
CXCL1P09341 SPDYE22P-201ENST00000582158 798 ntBASIC10.79□□□□□ -0.68
CXCL1P09341 AC027612.4-201ENST00000605371 583 ntBASIC10.79□□□□□ -0.68
CXCL1P09341 AC104506.1-201ENST00000609247 429 ntBASIC10.79□□□□□ -0.68
CXCL1P09341 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL1P09341 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL1P09341 AL590560.3-201ENST00000623350 461 ntBASIC10.79□□□□□ -0.68
CXCL1P09341 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL1P09341 HK2P1-201ENST00000447818 2737 ntBASIC10.79□□□□□ -0.68
CXCL1P09341 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
CXCL1P09341 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL1P09341 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL1P09341 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CXCL1P09341 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL1P09341 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL1P09341 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CXCL1P09341 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
CXCL1P09341 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.78□□□□□ -0.68
CXCL1P09341 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CXCL1P09341 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC10.78□□□□□ -0.68
CXCL1P09341 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.78□□□□□ -0.68
CXCL1P09341 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC10.78□□□□□ -0.68
CXCL1P09341 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CXCL1P09341 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
CXCL1P09341 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
CXCL1P09341 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CXCL1P09341 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
CXCL1P09341 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC10.78□□□□□ -0.68
CXCL1P09341 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC10.78□□□□□ -0.68
CXCL1P09341 AL442647.2-201ENST00000429864 857 ntBASIC10.78□□□□□ -0.68
CXCL1P09341 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 AC241585.1-201ENST00000433527 519 ntBASIC10.78□□□□□ -0.68
CXCL1P09341 RASL12-203ENST00000434605 982 ntTSL 2 BASIC10.78□□□□□ -0.68
CXCL1P09341 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC10.78□□□□□ -0.68
CXCL1P09341 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC10.78□□□□□ -0.68
CXCL1P09341 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL1P09341 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC10.78□□□□□ -0.68
CXCL1P09341 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC10.78□□□□□ -0.68
CXCL1P09341 AC112482.1-201ENST00000492080 688 ntBASIC10.78□□□□□ -0.68
CXCL1P09341 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms