Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSF1RP07333 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CSF1RP07333 AC034205.3-201ENST00000603595 1376 ntBASIC16.77■□□□□ 0.27
CSF1RP07333 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC16.76■□□□□ 0.27
CSF1RP07333 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.76■□□□□ 0.27
CSF1RP07333 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC16.76■□□□□ 0.27
CSF1RP07333 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC16.76■□□□□ 0.27
CSF1RP07333 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 EGLN3-205ENST00000547327 2849 ntBASIC16.76■□□□□ 0.27
CSF1RP07333 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CSF1RP07333 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CSF1RP07333 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.76■□□□□ 0.27
CSF1RP07333 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CSF1RP07333 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16.76■□□□□ 0.27
CSF1RP07333 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CSF1RP07333 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CSF1RP07333 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC16.76■□□□□ 0.27
CSF1RP07333 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC16.76■□□□□ 0.27
CSF1RP07333 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 MIR5091-201ENST00000578707 93 ntBASIC16.76■□□□□ 0.27
CSF1RP07333 AC211476.2-201ENST00000608799 708 ntBASIC16.76■□□□□ 0.27
CSF1RP07333 BX322534.1-201ENST00000635574 241 ntBASIC16.76■□□□□ 0.27
CSF1RP07333 AC215524.1-201ENST00000635696 241 ntBASIC16.76■□□□□ 0.27
CSF1RP07333 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC16.76■□□□□ 0.27
CSF1RP07333 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.76■□□□□ 0.27
CSF1RP07333 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.76■□□□□ 0.27
CSF1RP07333 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CSF1RP07333 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSF1RP07333 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC16.75■□□□□ 0.27
CSF1RP07333 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC16.75■□□□□ 0.27
CSF1RP07333 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CSF1RP07333 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC16.75■□□□□ 0.27
CSF1RP07333 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CSF1RP07333 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CSF1RP07333 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC16.75■□□□□ 0.27
CSF1RP07333 AF274858.1-201ENST00000406288 372 ntBASIC16.75■□□□□ 0.27
CSF1RP07333 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.75■□□□□ 0.27
CSF1RP07333 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 HNRNPA3P12-201ENST00000437410 1063 ntBASIC16.75■□□□□ 0.27
CSF1RP07333 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC16.75■□□□□ 0.27
CSF1RP07333 BCRP4-201ENST00000506079 804 ntBASIC16.75■□□□□ 0.27
CSF1RP07333 FAM86KP-201ENST00000509817 987 ntBASIC16.75■□□□□ 0.27
CSF1RP07333 NAV1-210ENST00000593583 726 ntBASIC16.75■□□□□ 0.27
CSF1RP07333 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.75■□□□□ 0.27
CSF1RP07333 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC16.75■□□□□ 0.27
CSF1RP07333 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC16.75■□□□□ 0.27
CSF1RP07333 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.75■□□□□ 0.27
CSF1RP07333 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 AC012531.1-201ENST00000562848 2680 ntBASIC16.75■□□□□ 0.27
CSF1RP07333 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CSF1RP07333 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CSF1RP07333 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.75■□□□□ 0.27
CSF1RP07333 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CSF1RP07333 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSF1RP07333 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1RP07333 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CSF1RP07333 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1RP07333 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.74■□□□□ 0.27
CSF1RP07333 AGAP12P-201ENST00000585227 2359 ntBASIC16.74■□□□□ 0.27
CSF1RP07333 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1RP07333 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CSF1RP07333 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC16.74■□□□□ 0.27
CSF1RP07333 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSF1RP07333 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms