Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 RN7SL357P-201ENST00000581065 298 ntBASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 AC105137.3-201ENST00000617588 984 ntBASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.71□□□□□ -0.37
NPIPA3F8WFD2 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NPIPA3F8WFD2 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 GOLGA2P8-201ENST00000505201 779 ntBASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 RNA5SP406-201ENST00000516106 112 ntBASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 KLF17P1-201ENST00000547105 1126 ntBASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 AC007952.4-201ENST00000573866 637 ntBASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 AC140113.1-201ENST00000603467 169 ntBASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 BEND3P1-201ENST00000421591 1944 ntBASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPA3F8WFD2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms