Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 Z98885.3-201ENST00000624882 1757 ntBASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 RNA5SP491-201ENST00000362936 118 ntBASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 HDGF-202ENST00000368206 960 ntTSL 5 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 AC048382.6-201ENST00000621980 1223 ntBASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 MEP1AP1-201ENST00000636082 1097 ntBASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 AC097359.2-201ENST00000604992 2389 ntBASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 AC005912.2-201ENST00000619492 2400 ntBASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC187A0A096LP49 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AP001267.2-201ENST00000532619 2086 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 LILRP2-202ENST00000413572 1383 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 OR7E155P-201ENST00000412208 1014 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AC136604.1-202ENST00000425471 771 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 KRT8P30-201ENST00000432100 650 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AC133141.1-201ENST00000443015 339 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 KRT19P4-201ENST00000443208 943 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AC007279.1-201ENST00000448547 837 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 VDAC1P11-201ENST00000458323 852 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 RPS18P9-201ENST00000482817 460 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AC112250.1-201ENST00000504640 745 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 BCL2L12P1-201ENST00000508390 733 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AC091304.3-201ENST00000566500 716 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 MIR4254-201ENST00000581063 76 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 AC011462.4-201ENST00000616866 449 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 MIR6816-201ENST00000620368 66 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 PLS3-210ENST00000626746 216 ntTSL 4 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 CASP16P-204ENST00000635032 809 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 RCC2P1-201ENST00000452257 1476 ntBASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC187A0A096LP49 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms