Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 Z98885.3-201ENST00000624882 1757 ntBASIC17.15■□□□□ 0.34
UPF2Q9HAU5 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.34
UPF2Q9HAU5 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
UPF2Q9HAU5 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
UPF2Q9HAU5 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
UPF2Q9HAU5 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 RPL13AP3-202ENST00000494676 1473 ntBASIC17.14■□□□□ 0.33
UPF2Q9HAU5 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 DGCR5-201ENST00000399539 862 ntBASIC17.14■□□□□ 0.33
UPF2Q9HAU5 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 BCRP2-202ENST00000447763 634 ntBASIC17.14■□□□□ 0.33
UPF2Q9HAU5 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 BCRP6-201ENST00000510112 632 ntBASIC17.14■□□□□ 0.33
UPF2Q9HAU5 BCRP7-201ENST00000511549 544 ntBASIC17.14■□□□□ 0.33
UPF2Q9HAU5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 AL022328.1-201ENST00000610050 478 ntBASIC17.14■□□□□ 0.33
UPF2Q9HAU5 AC139530.3-201ENST00000620344 690 ntBASIC17.14■□□□□ 0.33
UPF2Q9HAU5 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UPF2Q9HAU5 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 AP006294.1-201ENST00000415407 339 ntBASIC17.13■□□□□ 0.33
UPF2Q9HAU5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 AC015936.2-201ENST00000593177 259 ntBASIC17.13■□□□□ 0.33
UPF2Q9HAU5 AC022400.8-201ENST00000623453 3599 ntBASIC17.13■□□□□ 0.33
UPF2Q9HAU5 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 AL021155.1-201ENST00000438808 2637 ntBASIC17.13■□□□□ 0.33
UPF2Q9HAU5 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UPF2Q9HAU5 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC17.12■□□□□ 0.33
UPF2Q9HAU5 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms